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[OpenFOAM.com] v1606+ problems with installation of foamyHexMesh

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Old   September 15, 2016, 00:14
Default v1606+ problems with installation of foamyHexMesh
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Hi

I tired to allwmake foamymesh. I got error

"make: *** [/scratch/vazem/my_app/OpenFOAM/OpenFOAM-v1606+/platforms/linux64GccDPInt32Opt/applications/utilities/mesh/generation/foamyMesh/conformalVoronoiMesh/DelaunayMeshTools/DelaunayMeshTools.o] Error 1"

Can anyone tell me how to resolve it.

Thank you

----

any response?

Last edited by wyldckat; September 17, 2016 at 08:24. Reason: merged 2 posts 1 day apart from each other
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Old   September 16, 2016, 03:38
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Hi,

To get a response:

1. Change title of the post to "Problem with OpenFOAM+ v1606 compilation".
2. Attach your compilation log file.
3. Describe your installation environment.

Right now your post contains no information to help you. So people have to guess that...
1. You are building OpenFOAM+ v1606 from compilation location.
2. You have problem somewhere in conformalVoronoiMesh from the single line you have posted.

(though I guess with lots of questions here, people just ignore your post without figuring out all these details).

Sometimes the error could be caused by missing CGAL, sometimes it could be caused by misconfigured CGAL, you see, there are lots of variants.
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Last edited by alexeym; September 20, 2016 at 15:04. Reason: typos
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Old   September 17, 2016, 08:26
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To add to Alexey's answer - @mvee: To create a complete log file, run the following commands:
Code:
foam
./Allwmake > log.make 2>&1
gzip < log.make > log.make.gz
Then attached the file "log.make.gz" to your next post.
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Old   September 18, 2016, 22:00
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Hi

Thanks Alexey and Bruno

I attached log file.
Please look and suggest.

Thank you
Attached Files
File Type: gz log.make.gz (19.3 KB, 10 views)
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Old   September 19, 2016, 02:33
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Hi,

Let's continue to eliminate necessity for guesses:

1. What distribution do you use?
2. What compiler do you use?

Output in log-file looks like missing boost and GMP libraries, do you have them installed?

This warning:

Code:
boundBoxI.H:207:13: warning: ‘bool Foam::operator!=(const Foam::boundBox&, const Foam::boundBox&)’ has not been declared within Foam
 inline bool Foam::operator!=(const boundBox& a, const boundBox& b)
             ^~~~
could be a sign of gcc 6 and outdated code-base, since in foundation's 4.x release these things were fixed.
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Old   September 19, 2016, 03:02
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HI

I have CentOS 6.6 and and gcc 6.2.
I donot know about boost and GMP but they are already there in thirdparty.

Thank you
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Old   September 20, 2016, 02:35
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Well, I have downloaded and checked contents of ThirdParty-v1606+.tgz. And really boost and CGAL are there (at least sources) but there are no mpfr and no gmp (though maybe they are downloaded by makeParaview script). Check if you really have these folders:

Code:
-I/scratch/vazem/my_app/OpenFOAM/ThirdParty-v1606+/platforms/linux64Gcc/CGAL-4.8/include/CGAL

-I/scratch/vazem/my_app/OpenFOAM/ThirdParty-v1606+/platforms/linux64Gcc/CGAL-4.8/include

-I/scratch/vazem/my_app/OpenFOAM/ThirdParty-v1606+/platforms/linux64/mpfr-3.1.3/include

-I/scratch/vazem/my_app/OpenFOAM/ThirdParty-v1606+/platforms/linux64/gmp-6.1.1/include

-I/scratch/vazem/my_app/OpenFOAM/ThirdParty-v1606+/platforms/linux64Gcc/boost_1_61_0/include
If no, then either install gmp-devel, mpfr-devel, boost-devel packages system-wide, install CGAL manually (or maybe you can try makeCGAL script). And then you can proceed with foamyHexMesh.
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Old   September 20, 2016, 03:33
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Hi Alexeym

All folders are available at the location mentioned above.
Is there any other cross check to resolve this issue.

Thank you
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Old   September 20, 2016, 15:45
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Hi,

Unfortunately I have run out of ideas (since I prefer to manage third-party software with distribution's package manager). So you need wait for a person who uses OpenFOAM+, build third-party software from sources, and has similar problem (or is not lazy enough to try to reproduce your error and find a solution).
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Old   September 20, 2016, 21:24
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anyway thanks for your response
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Old   September 24, 2016, 14:09
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Quick answer: I don't have enough time to test things myself, but my best guess is that the GCC+GMP+MPFR+MPC version stack that is being used is incompatible with CGAL 4.8.

I can assure that the instructions written here: https://openfoamwiki.net/index.php/I...HEL#CentOS_6.7 - using the following version stack:
Code:
gcc-4.8.5
gmp-5.1.2
mpfr-3.1.2
mpc-1.0.1
will work as intended and foamyHexMesh et al will be compiled properly... or at least they should be.
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Old   October 26, 2016, 11:07
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Hi there,

I just had a similar problem here. I checked (GCC+GMP+MPFR+MPC) as Bruno says and realized that mpc wasn't installed. Once I solved that, the same error still appeared but I realized that GCAL was also uninstalled.

So after install GCAL 4.9 and mpc, the compilation ended without errors. You probably had both mpc/GCAL installed but maybe there is some problem with incompatible versions.
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