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Old   May 25, 2009, 11:34
Default OpenFOAM-1.5-dev compiling problem
  #21
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parham momeni
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Hi,

I have downloaded the 1.5-dev version from http://powerlab.fsb.hr/ped/kturbo/OpenFOAM/release/ , but I have difficulty compiling it.
Here is the exact process that I have done:

cd /home/ad/OpenFOAM

1-I did : tar -xzf OpenFOAM-1.5-dev.General_2009-04-11.tgz
2-I did : tar -xzf ThirdParty.General_2008-12-11.tgz
3-cd etc/
4-source bashrc
5-cd ~
6-vi .bashrc
7-I added . /home/ad/OpenFOAM/OpenFOAM-1.5-dev/etc/bashrc to the end of .bashrc in home directory, then I did source .bashrc (no error sofar)
9-when I start compileing it by typing ./Allwamke after almost one hour of compiling it returns me the following error (the src files are compiled with no errors, but neither of applications are compiled, they all come with Error 1 or Error 2):

make[3]: *** [/home/ad/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linux64GccDPOpt/makeFaMesh] Error 1
make[2]: *** [makeFaMesh] Error 2
Making dependency list for source file curvedEdges/curvedEdge.C
Making dependency list for source file curvedEdges/lineEdge.C
g++ -m64 -Dlinux64 -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -march=opteron -O3 -DNoRepository -ftemplate-depth-40 -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/decompositionAgglomeration/decompositionMethods/lnInclude -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/autoMesh/lnInclude -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/meshTools/lnInclude -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/triSurface/lnInclude -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/dynamicMesh/lnInclude -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/edgeMesh/lnInclude -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/finiteVolume/lnInclude -IlnInclude -I. -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/OpenFOAM/lnInclude -I/home/ad/OpenFOAM/OpenFOAM-1.5-dev/src/OSspecific/Unix/lnInclude -fPIC Make/linux64GccDPOpt/snappyHexMesh.o -L/home/ad/OpenFOAM/OpenFOAM-1.5-dev/lib/linux64GccDPOpt \
-L/home/ad/OpenFOAM/OpenFOAM-1.5-dev/lib/linux64GccDPOpt/openmpi-1.2.6 -lparMetisDecompositionMethod -lfiniteVolume -ldecompositionMethods -ldynamicMesh -lmeshTools -lautoMesh -lOpenFOAM -liberty -ldl -lm -o /home/ad/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linux64GccDPOpt/snappyHexMesh
/usr/bin/ld: cannot find -lfiniteVolume
collect2: ld returned 1 exit status
make[3]: *** [/home/ad/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linux64GccDPOpt/snappyHexMesh] Error 1
make[2]: *** [snappyHexMesh] Error 2



or



linux64GccDPOpt \
-lmeshTools -lfiniteVolume -ldynamicMesh -lOpenFOAM -liberty -ldl -lm -o /home/ad/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linux64GccDPOpt/blockMesh
/usr/bin/ld: cannot find -lmeshTools
collect2: ld returned 1 exit status
make[3]: *** [/home/ad/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linux64GccDPOpt/blockMesh] Error 1
make[2]: *** [blockMesh] Error 2
make[2]: Target `application' not remade because of errors.
make[1]: *** [generation] Error 2
make[1]: Target `application' not remade because of errors.
make: *** [mesh] Error 2
make: Target `application' not remade because of errors.
+ '[' '' = doc ']'
[ad@fluent-srv4 OpenFOAM-1.5-dev]$


10-It did have no have no affect if I use the binary version of the Third party or the developed version I am getting with both the same error.

Can anyone help me? Am I doing something Wrong? (should I do it as root??)
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Old   June 17, 2009, 04:05
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Marco Müller
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Hi,

I received a similar error, which should be no problem for the professionals. The build process of 1.5-dev on my OpenSuse 11.0 was successful until the solvers came:

...
+ cd solvers
+ wmake all
Making dependency list for source file coodles.C
Making dependency list for source file sixDOFSolver.C
SOURCE=sixDOFSolver.C ; g++ -m64 -Dlinux64 -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -march=opteron -O3 -DNoRepository -ftemplate-depth-40 -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/meshTools/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/ODE/lnInclude -IlnInclude-I. -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/OpenFOAM/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/OSspecific/Unix/lnInclude -fPIC -c $SOURCE-o Make/linux64GccDPOpt/sixDOFSolver.o
SOURCE=coodles.C ; g++ -m64 -Dlinux64 -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -march=opteron -O3 -DNoRepository -ftemplate-depth-40 -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/finiteVolume/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/thermophysicalModels/specie/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/thermophysicalModels/basic/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/turbulenceModels/LES-I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/turbulenceModels/LES/LESdeltas/lnInclude -IlnInclude -I. -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/OpenFOAM/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/OSspecific/Unix/lnInclude -fPIC -c $SOURCE -o Make/linux64GccDPOpt/coodles.o
g++ -m64 -Dlinux64 -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -march=opteron -O3 -DNoRepository -ftemplate-depth-40 -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/meshTools/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/ODE/lnInclude -IlnInclude -I. -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/OpenFOAM/lnInclude -I/home/marco/OpenFOAM/OpenFOAM-1.5-dev/src/OSspecific/Unix/lnInclude -fPIC Make/linux64GccDPOpt/sixDOFSolver.o-L/home/marco/OpenFOAM/OpenFOAM-1.5-dev/lib/linux64GccDPOpt \
-lmeshTools -lODE -lOpenFOAM -liberty -ldl -lm -o /home/marco/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linux64GccDPOpt/sixDOFSolver
/usr/lib64/gcc/x86_64-suse-linux/4.3/../../../../x86_64-suse-linux/bin/ld: cannot find -liberty
collect2: ld returned 1 exit status
...

So, does anyone know why this appears? As I said, before there were no errors!

Thank you
Marco
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Old   June 22, 2009, 14:22
Default What should be the end of Allwmake in OF1.5-dev?
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Sylvain Martel
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Hi,

I would like to install OF1.5-dev correctly on my Ubuntu 8.04. The "foamSystemCheck" is ok. The foamInstallationTest is ok too but the following error occured during the ./Allwmake in OpenFOAM1.5-dev/:

make[4]:
make[4]:
make[4]: Rien faire pour application .
[: 191: ==: unexpected operator
make[4]: Rien faire pour application .
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/patchSummary est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/expandDictionary est jour.
g++ -m32 -Dlinux -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-40 -IlnInclude -I. -I/home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/src/OpenFOAM/lnInclude -I/home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/src/OSspecific/Unix/lnInclude -fPIC -pthread Make/linuxGccDPOpt/foamDebugSwitches.o -L/home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/lib/linuxGccDPOpt \
-lbasicThermophysicalModels -lchemistryModel -lcombustionThermophysicalModels -lcompressibleLESModels -lcompressibleRASModels -ldecompositionMethods -ldieselSpray -ldynamicFvMesh -ldynamicMesh -ledgeMesh -lengine -lerrorEstimation -lfiniteVolume -lforces -lfvMotionSolver -lincompressibleLESModels -lincompressibleTransportModels -lincompressibleRASModels -linterfaceProperties -llagrangianIntermediate -llagrangian -llaminarFlameSpeedModels -lLESdeltas -lLESfilters -lliquidMixture -lliquids -lmeshTools -lODE -lOpenFOAM -lpdf -lphaseModel -lradiation -lrandomProcesses -lsampling -lsolidMixture -lsolids -lspecie -lthermophysicalFunctions -ltopoChangerFvMesh -ltriSurface -lOpenFOAM -ldl -lm -o /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/foamDebugSwitches
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/wallGradU est jour.
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/yPlusRAS est jour.
/home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/lib/linuxGccDPOpt/liberrorEstimation.so: undefined reference to `Foam::undoableMeshCutter::setRefinement(Foam::cel lCuts const&, Foam:olyTopoChange&)'
/home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/lib/linuxGccDPOpt/liberrorEstimation.so: undefined reference to `Foam::undoableMeshCutter::removeSplitFaces(Foam:: List<int> const&, Foam:olyTopoChange&)'
collect2: ld returned 1 exit status
make[2]: *** [/home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/foamDebugSwitches] Erreur 1
make[1]: *** [foamDebugSwitches] Erreur 2
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/wallHeatFlux est jour.
[: 191: ==: unexpected operator
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/foamInfoExec est jour.
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/streamFunction est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/findRoot est jour.
[: 191: ==: unexpected operator
[: 191: ==: unexpected operator
make[3]: Rien faire pour application .
[: 191: ==: unexpected operator
[: 191: ==: unexpected operator
make[4]: Rien faire pour application .
[: 191: ==: unexpected operator
make[4]: Rien faire pour application .
[: 191: ==: unexpected operator
make[4]: Rien faire pour application .
[: 191: ==: unexpected operator
make[3]: Rien faire pour application .
[: 191: ==: unexpected operator
make[3]: Rien faire pour application .
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/Pe est jour.
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/flowType est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/foamFormatConvert est jour.
make[1]: La cible application n'a pas pu tre refabrique cause d'erreurs.
make: *** [miscellaneous] Erreur 2
[: 191: ==: unexpected operator
[: 191: ==: unexpected operator
+ wmake libso extrudeModel
'/home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/lib/linuxGccDPOpt/libextrudeModel.so' is up to date.
+ wmake



make[4]: Rien faire pour application .
[: 191: ==: unexpected operator
make[4]: Rien faire pour application .
[: 191: ==: unexpected operator
make[4]: Rien faire pour application .
[: 191: ==: unexpected operator
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/insideCells est jour.
make[3]: Rien faire pour application .
[: 191: ==: unexpected operator
make[3]: Rien faire pour application .
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/cellSet est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/surfaceCoarsen est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/surfaceConvert est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/surfaceOrient est jour.
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/deformedTetFemGeom est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/surfaceMeshTriangulate est jour.
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/zipUpMesh est jour.
make[2]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/surfaceTransformPoints est jour.
make[3]: /home/sylvain/OpenFOAM/OpenFOAM-1.5-dev/applications/bin/linuxGccDPOpt/renumberMesh est jour.
make: La cible application n'a pas pu tre refabrique cause d'erreurs.
+ [ = doc ]
sylvain@sylvain-laptop:~/OpenFOAM/OpenFOAM-1.5-dev$


I would like to know if all is ok since when I try to compile PV3FoamReader module I got nothing: :

sylvain@sylvain-laptop:~/OpenFOAM/OpenFOAM-1.5-dev/applications/utilities/postProcessing/graphics/PV3FoamReader$ ./Allwclean
+ rm -r PV3FoamReader/Make
rm: ne peut enlever `PV3FoamReader/Make': Aucun fichier ou dossier de ce type
+ wclean libso vtkPV3Foam
wclean vtkPV3Foam

sylvain@sylvain-laptop:~/OpenFOAM/OpenFOAM-1.5-dev/applications/utilities/postProcessing/graphics/PV3FoamReader$ ./Allwmake
+ [ -d /home/sylvain/OpenFOAM/ThirdParty/ParaView-3.3-cvs/platforms/linuxGcc -a -r /home/sylvain/OpenFOAM/ThirdParty/ParaView-3.3-cvs/platforms/linuxGcc ]
sylvain@sylvain-laptop:~/OpenFOAM/OpenFOAM-1.5-dev/applications/utilities/postProcessing/graphics/PV3FoamReader$
sylvain@sylvain-laptop:~/OpenFOAM/OpenFOAM-1.5-dev/applications/utilities/postProcessing/graphics/PV3FoamReader$



What should be the output of this compiling PV3FoamReader? Thanks...
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Old   June 29, 2009, 15:24
Default ParaView 3.4 was the solution
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Sylvain Martel
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Hi, I finaly install OpenFOAM-1.5-dev with paraFoam. All is OK now. I solved the problem by installing paraview 3.4 and by modifying buildParaView3.3-cvs to have a buildParaView-3.4.0 (in bin and bin/tools), pointing to that and the bashrc of paraview (in etc/apps/paraview3) to point the correct version on paraview to install.

I use Ubuntu 8.04 with Qmake 4.3.4 and gcc 4.3.1.
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Old   July 10, 2009, 07:38
Default
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Julian Krick
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Quote:
Hi, I finaly install OpenFOAM-1.5-dev with paraFoam. All is OK now. I solved the problem by installing paraview 3.4 and by modifying buildParaView3.3-cvs to have a buildParaView-3.4.0 (in bin and bin/tools), pointing to that and the bashrc of paraview (in etc/apps/paraview3) to point the correct version on paraview to install.

I use Ubuntu 8.04 with Qmake 4.3.4 and gcc 4.3.1.
Thanks Sylvain, I'm just compiling ParaView3.4.0. I hope it'll work.
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Last edited by Julian K.; July 10, 2009 at 07:57.
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Old   July 10, 2009, 10:27
Default All is OK?
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Sylvain Martel
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I Julian,

Let me know if you succeed or not.

SM
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Old   July 13, 2009, 05:00
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Hi Sylvain,

unfortunately I did not succeed . Here is what I did:

- I downloaded the source file of Paraview3.4

- unzipped it into the ThirdParty directory

- created a buildParaView3.4.0 in bin and bin/tools

- in settings.sh I set the following: compilerInstall=OpenFOAM

- corrected the file buildParaViewFunctions with the original file from OF-1.5

- then the following command:
rm -rf ParaView3.4.0/platforms
buildParaView3.4.0
- the compilation succeed

- then:
cd $FOAM_UTILITIES/post-processing/graphics/PV3FoamReader
./Allwclean
./Allwmake

which gave me the following output:
Code:
+ [ -d /home/ofdevel/OpenFOAM/ThirdParty/ParaView-3.4.0/platforms/linux64Gcc -a -r /home/ofdevel/OpenFOAM/ThirdParty/ParaView-3.4.0/platforms/linux64Gcc ]
(this is kind of strange, because my paraview directory is called ThirdParty/ParaView3.4.0 and not ThirdParty/ParaView-3.4.0 as stated in the output. There is no such directory.)

- then I tried to start paraFoam:
paraFoam &
and got this output:
Code:
/home/ofdevel/OpenFOAM/OpenFOAM-1.5-dev/bin/paraFoam: 103: paraview: not found
So where's the Problem?

Somehow, my shell doesn't know the command: paraview
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Old   July 13, 2009, 08:39
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Henrik Rusche
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Dear Julian,

your problem with the dash sounds faimilar. See here for discussion: Fonud a couple of script errors in 1.5-dev

Henrik
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Old   July 13, 2009, 10:24
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Hi Julian,

When you unzip ParaView 3.4.0, The true directory name is ParaView-3.4.0. You have to keep it like this because the installation files are linked to this one. So Clean your ThirdParty folder with removing the ParaView3.4 and unzip it again.

Go to OpenFOAM-1.5-dev/bin and copy and paste the buildParaView3.3-cvs and rename it buildParaView-3.4.0. Open it and change de paraview SRC and MAJOR_VERSION:
PARAVIEW_SRC="ParaView-3.4.0"
PARAVIEW_MAJOR_VERSION="3.4.0"

Go to OpenFOAM-1.5-dev/bin/tools and copy and paste the buildParaView3.3 and rename it buildParaView-3.4.0. Open it and change:
PARAVIEW_SRC=ParaView-3.4.0
PARAVIEW_MAJOR_VERSION=3.4.0

Go to OpenFOAM-1.5-dev/etc/apps/paraview3 and open bashrc. Change the version by replacing 3.3-cvs by 3.4.0.

Go to OpenFOAM-1.5-dev/etc and set the compiler installation setting to OpenFOAM in settings.csh and in settings.sh (compilerInstall=OpenFOAM)

After this, go to your OpenFOAM-1.5-dev folder in a terminal and type ./Allwmake.

if you don't have error during the process, all should be OK since paraview should be installed during this process. As you saw, my version of OpenFOAM is the development version 1.5-dev.
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Old   July 15, 2009, 07:46
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Hey Sylvain,

thank you very much for the explicit description! I'm just compiling ParaView-3.4.0 separately. I tried to compile OpenFOAM-1.5-dev, but my system stopped the process after 2 minutes, saying that all files are up-to-date. Still, ParaView didn't work.

Anyway, the system is comiling ParaView separately - I'll post the result when it's done.
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Old   July 15, 2009, 08:32
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So, compiling just finished.

Now, after compiling the PV3FoamReader, paraview and paraFoam is working properly. Thank you!
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Old   July 16, 2009, 10:23
Default OpenFOAM-1.5-extend - Installtion
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Hi,

I attached a short tutorial, that I wrote based on my experiences, which should explain how to install OpenFOAM-1.5-extend (OpenFOAM-1.5-dev).

Does someone have any suggestions or corrections to it?
Attached Files
File Type: zip OpenFOAM-1.5-extend - Installation.zip (26.8 KB, 138 views)
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Old   July 28, 2009, 09:16
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Hi,

How can I see the installation instructions? I have unzziped the file but I can not see anything.

Is there any installation script for OpenFoam 1.5-dev?
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Old   August 3, 2009, 05:24
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Hi,
I have installed OpenFoam 1.5-dev succesfully with the instruction of Julian but with the details of smart about settings.csh and settings.sh.

I have noticed an important detail for me. With I untar the package, several execution files do not have execution permission. So, for example, I can not do ./Allwmake because of permission.
With sudo ./Allwmake, the command was not known.
So the solution for my case was to change the permission to all OpenFoam folder with chmod -R 777 OpenFoam ( maybe 755 would be enough but ....).

I have checked the installation and all is ok, paraFoam and ParaView too.

Any idea why I had to do that? Any other possibility?
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Old   December 18, 2009, 11:06
Default Installation of openfoam-1.5-dev on Ubuntu 8.10 or 9.10
  #35
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George XU
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I have collected the instructions about the compilation of openfoam-1.5-dev, which have been published in the openfoam user community. With some painful trial, I have successfully compiled openfoam-1.5-dev to both 64-bit Ubuntu 8.10 and 9.10 machines recently. The procedures are summarized in the following two files, respectively. I wish that my efforts can give you some boost in the compilation of openfoam in the relevant OS.
Both ParaView-3.4.0 and 3.6.1 are tested and instructions for their compilation can be found in the attached doc also.
Please note that I cannot gurantee that the links to the respective packages provided in the attached files are correct. If not, user need necessarily to justify it.
Cheers!
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