I installed V1.3 succesfully f
I installed V1.3 succesfully from binary on my workstation Fedora 2 but when I install on our linux cluster (gentoo), I get the following error message:
blockMesh: error while loading shared libraries: libstdc++.so.6: cannot handle TLS data. I passed both foamSystemCheck and foamInstallationCheck tests. I installed previously V1.1 and 1.2 on this cluster with no problem. I tried to compile OpenFOAM V1.3 using ./Allwmake but I got some errors and the executables was not generated. Previously, I compiled V1.1 and V1.2 with no problems. Some of the Errors while compiling: SOURCE_DIR=chemistryReaders/chemkinReader SOURCE=chemistryReaders/chemkinReader/chemkinLexer.L ; foamFlex++ -f $SOURCE ; mv lex.yy.cc Make/linuxGcc4DPOpt/chemkinLexer.C ; g++ -m32 -Dlinux -DDP -Wa ll -W -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-30 -I/home/maka/OpenFOAM/OpenFOAM-1.3/src/finiteVolume/lnInclude -I/ho me/maka/OpenFOAM/OpenFOAM-1.3/src/thermophysicalModels/basic/lnInclude -I/home/maka/OpenFOAM/OpenFOAM-1.3/src/thermophysicalModels/specie/lnInclude - I/home/maka/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude -IlnInclude -I. -fPIC -pthread -c Make/linuxGcc4DPOpt/chemkinLexer.C -o Make/linuxGcc4DPOpt/ chemkinLexer.o /bin/sh: foamFlex++: command not found mv: cannot stat `lex.yy.cc': No such file or directory g++: Make/linuxGcc4DPOpt/chemkinLexer.C: No such file or directory g++: no input files make: *** [Make/linuxGcc4DPOpt/chemkinLexer.o] Error 1 SOURCE_DIR=. SOURCE=laplacianFoam.C ; g++ -m32 -Dlinux -DDP -Wall -W -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-30 -I/home/maka/Op enFOAM/OpenFOAM-1.3/src/finiteVolume/lnInclude -I/home/maka/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude -IlnInclude -I. -fPIC -pthread -c $SOURCE -o Make/linuxGcc4DPOpt/laplacianFoam.o /home/maka/OpenFOAM/OpenFOAM-1.3/wmake/bashScripts/mkObjectDir /home/maka/OpenFOAM/OpenFOAM-1.3/applications/bin/linuxGcc4DPOpt/laplacianFoam g++ -m32 -Dlinux -DDP -Wall -W -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-30 -I/home/maka/OpenFOAM/OpenFOAM-1.3/src/fi niteVolume/lnInclude -I/home/maka/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude -IlnInclude -I. -fPIC -pthread Make/linuxGcc4DPOpt/laplacianFoam.o -L/ home/maka/OpenFOAM/OpenFOAM-1.3/lib/linuxGcc4DPOpt \ -lfiniteVolume -lOpenFOAM -liberty -o /home/maka/OpenFOAM/OpenFOAM-1.3/applications/bin/linuxGcc4DPOpt/laplacianFoam /home/maka/OpenFOAM/linux/gcc-4.1.0/bin/../lib/gcc/i686-pc-linux-gnu/4.1.0/../.. /../libstdc++.so: undefined reference to `___tls_get_addr' collect2: ld returned 1 exit status make: *** [/home/maka/OpenFOAM/OpenFOAM-1.3/applications/bin/linuxGcc4DPOpt/laplacianFoam] Error 1 Can anybody help spot the error. best regards, Maka |
I attach here the result of fo
I attach here the result of foamInstallationTest, see the following:
Executing /home/maka/OpenFOAM/OpenFOAM-1.3/bin/foamInstallationTest: Checking basic setup... ------------------------------------------------------------------------------- Shell: bash Host: troma OS: Linux version 2.4.25 User: maka User_config: /home/maka/.bashrc Foam_config: /home/maka/.OpenFOAM-1.3/bashrc sourced correctly. ------------------------------------------------------------------------------- Checking main FOAM env variables... ------------------------------------------------------------------------------- Environment_variable Set_to_file_or_directory Valid Crit ------------------------------------------------------------------------------- $WM_PROJECT_INST_DIR /home/maka/OpenFOAM yes yes $WM_PROJECT_USER_DIR /home/maka/OpenFOAM/maka-1.3 yes no $FOAM_JOB_DIR /home/maka/OpenFOAM/jobControl yes yes ------------------------------------------------------------------------------- Checking the FOAM env variables set on the PATH... ------------------------------------------------------------------------------- Environment_variable Set_to_file_or_directory Valid Path Crit ------------------------------------------------------------------------------- $WM_PROJECT_DIR /home/maka/OpenFOAM/OpenFOAM-1.3 yes yes yes $FOAM_USER_APPBIN ...-1.3/applications/bin/linuxGcc4DPOpt yes yes no $FOAM_APPBIN ...-1.3/applications/bin/linuxGcc4DPOpt yes yes yes $WM_DIR .../maka/OpenFOAM/OpenFOAM-1.3/wmake yes yes yes $FOAMX_PATH ...ations/utilities/preProcessing/FoamX yes no yes $CEI_HOME /usr/local/ensight/CEI no no $JAVA_PATH ...maka/OpenFOAM/linux/j2sdk1.4.2_05 yes yes no $MICO_ARCH_PATH ...mico-2.3.11/platforms/linuxGcc4DPOpt yes yes yes $LAM_ARCH_PATH ...c/lam-7.1.1/platforms/linuxGcc4DPOpt yes yes yes $MPICH_ARCH_PATH --------- env variable not set --------- no ------------------------------------------------------------------------------- Checking the FOAM env variables set on the LD_LIBRARY_PATH... ------------------------------------------------------------------------------- Environment_variable Set_to_file_or_directory Valid Path Crit ------------------------------------------------------------------------------- $FOAM_LIBBIN ...FOAM/OpenFOAM-1.3/lib/linuxGcc4DPOpt yes yes yes $FOAM_USER_LIBBIN ...nFOAM/maka-1.3/lib/linuxGcc4DPOpt yes yes no $LAM_ARCH_PATH ...c/lam-7.1.1/platforms/linuxGcc4DPOpt yes yes yes ------------------------------------------------------------------------------- Software versions ------------------------------------------------------------------------------- Software Version Location ------------------------------------------------------------------------------- gcc 4.1.0 /home/maka/OpenFOAM/linux/gcc-4.1.0/bin/gcc java 1.4.2_05 /home/maka/OpenFOAM/linux/j2sdk1.4.2_05/bin/java head: `-1' option is obsolete; use `-n 1' since this will be removed in the future gzip 1.3.5 /bin/gzip tar 1.3.5 /bin/tar icoFoam ...M/OpenFOAM-1.3/applications/bin/linuxGcc4DPOpt/icoFoam ------------------------------------------------------------------------------- Checking file/directory permissions... ------------------------------------------------------------------------------- File/directory Set Reqd Crit ------------------------------------------------------------------------------- Checking networking... ------------------------------------------------------------------------------- Action Result Crit ------------------------------------------------------------------------------- Pinging_troma Successful yes Pinging_localHost Successful yes Test_rsh: Unsuccessful_connection_refused* yes Test_ssh: Successful yes (*) Only one of rsh or ssh is required by the Foam enviroment. ------------------------------------------------------------------------------- Base configuration ok. Critical systems ok. |
Looks like your C++ compiler d
Looks like your C++ compiler does not compile correctly (undefined reference to `___tls_get_addr' )
Try recompiling gcc from sources and see if you can compile&/link any (non-Foam) c++ program. |
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