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Old   November 10, 2010, 04:23
Default snappyHexMesh aborting
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Tobias Holzmann
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Hi all,

i am using sHM for a complex mesh generation. Here a picture of my geometry.



The error.log got that output:

Code:
 --------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 3588 on node tobi exited on signal 9 (Killed).
--------------------------------------------------------------------------
The process.log (maybe it is helpful)

Code:
 /*---------------------------------------------------------------------------*\
| =========                 |                                                 |
| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
|  \\    /   O peration     | Version:  1.7.x                                 |
|   \\  /    A nd           | Web:      www.OpenFOAM.com                      |
|    \\/     M anipulation  |                                                 |
\*---------------------------------------------------------------------------*/
Build  : 1.7.x-2154baf2ac24
Exec   : snappyHexMesh -parallel -overwrite
Date   : Nov 09 2010
Time   : 23:21:06
Host   : tobi
PID    : 3588
Case   : /home/tobi/OpenFOAM/tobi-1.7.x/run/teg
nProcs : 6
Slaves : 
5
(
tobi.3589
tobi.3590
tobi.3591
tobi.3592
tobi.3593
)

Pstream initialized with:
    floatTransfer     : 0
    nProcsSimpleSum   : 0
    commsType         : nonBlocking
SigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0

Read mesh in = 0.05 s

Overall mesh bounding box  : (-0.02 -0.005 0) (0.02 0.005 1)
Relative tolerance         : 1e-06
Absolute matching distance : 1.00085e-06

Reading refinement surfaces.
Read refinement surfaces in = 0.06 s

Reading refinement shells.
Read refinement shells in = 0 s

Setting refinement level of surface to be consistent with shells.
Checked shell refinement in = 0 s


Determining initial surface intersections
-----------------------------------------

Edge intersection testing:
    Number of edges             : 45080
    Number of edges to retest   : 45080
    Number of intersected edges : 2996
Calculated surface intersections in = 0.19 s

Initial mesh : cells:14400  faces:45080  points:16359
Cells per refinement level:
    0    14400

Adding patches for surface regions
----------------------------------

Patch    Region
-----    ------
fluidR:

3    fluidR_CATIASTL

fluidL:

4    fluidL_CATIASTL

kapton:

5    kapton_CATIASTL

kupfer:

6    kupfer_CATIASTL

teg:

7    teg_CATIASTL

solidL:

[5] Found point (0.01 0.001 0.01) in cell 19 on processor 5
8    solidL_CATIASTL

solidR:

9    solidR_CATIASTL

Added patches in = 0.04 s

Selecting decompositionMethod hierarchical

Refinement phase
----------------

Reading external feature lines.
Read feature lines in = 0 s


Surface refinement iteration 0
------------------------------

Marked for refinement due to surface intersection : 3520 cells.
Marked for refinement due to curvature/regions    : 0 cells.
Determined cells to refine in = 0.03 s
Selected for refinement : 3520 cells (out of 14400)
Edge intersection testing:
    Number of edges             : 123584
    Number of edges to retest   : 97048
    Number of intersected edges : 16465
Refined mesh in = 0.28 s
After refinement surface refinement iteration 0 : cells:39040  faces:123584  points:45579
Cells per refinement level:
    0    10880
    1    28160
Balanced mesh in = 0.2 s
After balancing surface refinement iteration 0 : cells:39040  faces:123584  points:45579
Cells per refinement level:
    0    10880
    1    28160

Surface refinement iteration 1
------------------------------

Marked for refinement due to surface intersection : 4472 cells.
Marked for refinement due to curvature/regions    : 11949 cells.
Determined cells to refine in = 0.02 s
Selected for refinement : 16835 cells (out of 39040)
Edge intersection testing:
    Number of edges             : 500612
    Number of edges to retest   : 468419
    Number of intersected edges : 73362
Refined mesh in = 0.71 s
After refinement surface refinement iteration 1 : cells:156885  faces:500612  points:186911
Cells per refinement level:
    0    10142
    1    17967
    2    128776
Balanced mesh in = 0.71 s
After balancing surface refinement iteration 1 : cells:156885  faces:500612  points:186911
Cells per refinement level:
    0    10142
    1    17967
    2    128776

Surface refinement iteration 2
------------------------------

Marked for refinement due to surface intersection : 22656 cells.
Marked for refinement due to curvature/regions    : 51451 cells.
Determined cells to refine in = 0.09 s
Selected for refinement : 78544 cells (out of 156885)
Edge intersection testing:
    Number of edges             : 2257346
    Number of edges to retest   : 2175517
    Number of intersected edges : 305145
Refined mesh in = 3.03 s
After refinement surface refinement iteration 2 : cells:706693  faces:2257346  points:843814
Cells per refinement level:
    0    9962
    1    14918
    2    90813
    3    591000
Balanced mesh in = 3.94 s
After balancing surface refinement iteration 2 : cells:706693  faces:2257346  points:843814
Cells per refinement level:
    0    9962
    1    14918
    2    90813
    3    591000

Surface refinement iteration 3
------------------------------

Marked for refinement due to surface intersection : 2188 cells.
Marked for refinement due to curvature/regions    : 340760 cells.
Determined cells to refine in = 0.6 s
Selected for refinement : 368290 cells (out of 706693)
Edge intersection testing:
    Number of edges             : 10445246
    Number of edges to retest   : 10100679
    Number of intersected edges : 1283403
Refined mesh in = 89.64 s
After refinement surface refinement iteration 3 : cells:3284723  faces:10445246  points:3877741
Cells per refinement level:
    0    9500
    1    15307
    2    90029
    3    471639
    4    2698248
Balanced mesh in = 42.11 s
After balancing surface refinement iteration 3 : cells:3284723  faces:10445246  points:3877741
Cells per refinement level:
    0    9500
    1    15307
    2    90029
    3    471639
    4    2698248

Surface refinement iteration 4
------------------------------

No cells marked for refinement since reached limit 2000000.
Determined cells to refine in = 0.07 s
Selected for refinement : 0 cells (out of 3284723)
Stopping refining since too few cells selected.


Removing mesh beyond surface intersections
------------------------------------------

Found point (0.01 0.001 0.01) in cell -1 in global region 0 out of 1 regions.
Keeping all cells in region 0 containing point (0.01 0.001 0.01)
Selected for keeping : 3284723 cells.
Edge intersection testing:
    Number of edges             : 10445246
    Number of edges to retest   : 0
    Number of intersected edges : 1283403

Shell refinement iteration 0
----------------------------

No cells marked for refinement since reached limit 2000000.
Determined cells to refine in = 15.98 s
Selected for internal refinement : 107786 cells (out of 3284723)
Edge intersection testing:
    Number of edges             : 12705272
    Number of edges to retest   : 5098822
    Number of intersected edges : 1321931
Refined mesh in = 305.8 s
After refinement shell refinement iteration 0 : cells:4039225  faces:12705272  points:4627839
Cells per refinement level:
    0    8160
    1    21649
    2    98894
    3    605002
    4    3305520
Balanced mesh in = 184.03 s
After balancing shell refinement iteration 0 : cells:4039225  faces:12705272  points:4627839
Cells per refinement level:
    0    8160
    1    21649
    2    98894
    3    605002
    4    3305520

Shell refinement iteration 1
----------------------------

No cells marked for refinement since reached limit 2000000.
Determined cells to refine in = 8.15 s
Selected for internal refinement : 16205 cells (out of 4039225)
Edge intersection testing:
    Number of edges             : 13036268
    Number of edges to retest   : 1154277
    Number of intersected edges : 1325470
Refined mesh in = 1063.31 s
After refinement shell refinement iteration 1 : cells:4152660  faces:13036268  points:4732156
Cells per refinement level:
    0    8136
    1    18325
    2    121873
    3    638678
    4    3365648
Balanced mesh in = 2611.09 s
After balancing shell refinement iteration 1 : cells:4152660  faces:13036268  points:4732156
Cells per refinement level:
    0    8136
    1    18325
    2    121873
    3    638678
    4    3365648

Shell refinement iteration 2
----------------------------

No cells marked for refinement since reached limit 2000000.
Determined cells to refine in = 65.58 s
Selected for internal refinement : 1304 cells (out of 4152660)



Any ideas?
Best regards
Tobi
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