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swak4foam fails in parallel with -otherTime?

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Old   June 26, 2013, 10:42
Default swak4foam fails in parallel with -otherTime?
  #1
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Pablo Higuera
Join Date: Jan 2011
Posts: 239
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Phicau is on a distinguished road
Hi all,

I've just started using swak4foam as I learned some of its greatest features during OFW8.

I am trying to obtain dynamic pressure (excess over the hydrostatic), i.e. total pressure (p) of any time minus the one of the initial time step (actually of the first calculated time step) for a parallelized case.

My command is as follows:

Code:
mpirun -np 8 funkySetFields -parallel -time '0.1:' -otherTime 0.05 -otherCase . -create -field pDyn -expression "p-other(p)"
Resulting in:

Code:
/*---------------------------------------------------------------------------*\
| =========                 |                                                 |
| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
|  \\    /   O peration     | Version:  2.1.1                                 |
|   \\  /    A nd           | Web:      www.OpenFOAM.org                      |
|    \\/     M anipulation  |                                                 |
\*---------------------------------------------------------------------------*/
Build  : 2.1.1-221db2718bbb
Exec   : funkySetFields -parallel -time 0.1: -otherTime 0.05 -otherCase . -create -field pDyn -expression p-other(p)
Date   : Jun 26 2013
Time   : 16:22:28
Host   : "phicauWS"
PID    : 18356
Case   : /media/work/OpenFOAM/OpenFOAM-2.1.1/run/4sidesPiles
nProcs : 8
Slaves : 
7
(
"phicauWS.18357"
"phicauWS.18358"
"phicauWS.18359"
"phicauWS.18360"
"phicauWS.18361"
"phicauWS.18362"
"phicauWS.18363"
)

Pstream initialized with:
    floatTransfer     : 0
    nProcsSimpleSum   : 0
    commsType         : nonBlocking
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Disallowing user-supplied system call operations

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
swakVersion: 0.2.4 (Release date: 2013-05-24)
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0.1

Adding case ".", region region0 at t="0.05". Fields from that case can be accessed in expression with 'other(<field>)'

[0] swak4Foam: Allocating new repository for sampledMeshes
[2] swak4Foam: Allocating new repository for sampledMeshes
[1] swak4Foam: Allocating new repository for sampledMeshes
[3] swak4Foam: Allocating new repository for sampledMeshes
[4] swak4Foam: Allocating new repository for sampledMeshes
[5] swak4Foam: Allocating new repository for sampledMeshes
[6] swak4Foam: Allocating new repository for sampledMeshes
[7] swak4Foam: Allocating new repository for sampledMeshes
Actually using time 0 in other case


Time = 0.1
 Using command-line options

 Creating field pDyn

 Putting "p-other(p)" into field pDyn at t = "0.1" if condition "true" is true

[2] swak4Foam: Allocating new repository for sampledGlobalVariables
[3] swak4Foam: Allocating new repository for sampledGlobalVariables
[5] swak4Foam: Allocating new repository for sampledGlobalVariables
[0] swak4Foam: Allocating new repository for sampledGlobalVariables
[1] swak4Foam: Allocating new repository for sampledGlobalVariables
[4] swak4Foam: Allocating new repository for sampledGlobalVariables
[6] swak4Foam: Allocating new repository for sampledGlobalVariables
[7] swak4Foam: Allocating new repository for sampledGlobalVariables
[5] 
[5] 
[5] --> FOAM FATAL ERROR: 
[5]  Parser Error for driver FieldValueExpressionDriver at "1.9" :"Foreign mesh other does not have a field named p"
"p-other(p)"
          ^
----------|

Context of the error:


- Driver constructed from scratch
  Evaluating expression "p-other(p)"
[5] 
[5] 
[5]     From function parsingValue
[5]     in file lnInclude/CommonValueExpressionDriverI.H at line 1081.
[5] 
FOAM parallel run exiting
[5] 
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 5 in communicator MPI_COMM_WORLD 
with errorcode 1.
The analogous command in serial runs flawlessly.

The error does not make any sense for me. Why "1.9"? Even when using "-time 0.1" instead the error is the same one. Is this a bug or simply this feature does not work in parallel?

Best,

Pablo
Phicau is online now   Reply With Quote

Old   June 26, 2013, 11:40
Default
  #2
Assistant Moderator
 
Bernhard Gschaider
Join Date: Mar 2009
Posts: 3,915
Rep Power: 40
gschaider will become famous soon enoughgschaider will become famous soon enough
Quote:
Originally Posted by Phicau View Post
Hi all,

I've just started using swak4foam as I learned some of its greatest features during OFW8.

I am trying to obtain dynamic pressure (excess over the hydrostatic), i.e. total pressure (p) of any time minus the one of the initial time step (actually of the first calculated time step) for a parallelized case.

My command is as follows:

Code:
mpirun -np 8 funkySetFields -parallel -time '0.1:' -otherTime 0.05 -otherCase . -create -field pDyn -expression "p-other(p)"
Resulting in:

Code:
/*---------------------------------------------------------------------------*\
| =========                 |                                                 |
| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
|  \\    /   O peration     | Version:  2.1.1                                 |
|   \\  /    A nd           | Web:      www.OpenFOAM.org                      |
|    \\/     M anipulation  |                                                 |
\*---------------------------------------------------------------------------*/
Build  : 2.1.1-221db2718bbb
Exec   : funkySetFields -parallel -time 0.1: -otherTime 0.05 -otherCase . -create -field pDyn -expression p-other(p)
Date   : Jun 26 2013
Time   : 16:22:28
Host   : "phicauWS"
PID    : 18356
Case   : /media/work/OpenFOAM/OpenFOAM-2.1.1/run/4sidesPiles
nProcs : 8
Slaves : 
7
(
"phicauWS.18357"
"phicauWS.18358"
"phicauWS.18359"
"phicauWS.18360"
"phicauWS.18361"
"phicauWS.18362"
"phicauWS.18363"
)

Pstream initialized with:
    floatTransfer     : 0
    nProcsSimpleSum   : 0
    commsType         : nonBlocking
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Disallowing user-supplied system call operations

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
swakVersion: 0.2.4 (Release date: 2013-05-24)
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0.1

Adding case ".", region region0 at t="0.05". Fields from that case can be accessed in expression with 'other(<field>)'

[0] swak4Foam: Allocating new repository for sampledMeshes
[2] swak4Foam: Allocating new repository for sampledMeshes
[1] swak4Foam: Allocating new repository for sampledMeshes
[3] swak4Foam: Allocating new repository for sampledMeshes
[4] swak4Foam: Allocating new repository for sampledMeshes
[5] swak4Foam: Allocating new repository for sampledMeshes
[6] swak4Foam: Allocating new repository for sampledMeshes
[7] swak4Foam: Allocating new repository for sampledMeshes
Actually using time 0 in other case


Time = 0.1
 Using command-line options

 Creating field pDyn

 Putting "p-other(p)" into field pDyn at t = "0.1" if condition "true" is true

[2] swak4Foam: Allocating new repository for sampledGlobalVariables
[3] swak4Foam: Allocating new repository for sampledGlobalVariables
[5] swak4Foam: Allocating new repository for sampledGlobalVariables
[0] swak4Foam: Allocating new repository for sampledGlobalVariables
[1] swak4Foam: Allocating new repository for sampledGlobalVariables
[4] swak4Foam: Allocating new repository for sampledGlobalVariables
[6] swak4Foam: Allocating new repository for sampledGlobalVariables
[7] swak4Foam: Allocating new repository for sampledGlobalVariables
[5] 
[5] 
[5] --> FOAM FATAL ERROR: 
[5]  Parser Error for driver FieldValueExpressionDriver at "1.9" :"Foreign mesh other does not have a field named p"
"p-other(p)"
          ^
----------|

Context of the error:


- Driver constructed from scratch
  Evaluating expression "p-other(p)"
[5] 
[5] 
[5]     From function parsingValue
[5]     in file lnInclude/CommonValueExpressionDriverI.H at line 1081.
[5] 
FOAM parallel run exiting
[5] 
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 5 in communicator MPI_COMM_WORLD 
with errorcode 1.
The analogous command in serial runs flawlessly.

The error does not make any sense for me. Why "1.9"? Even when using "-time 0.1" instead the error is the same one. Is this a bug or simply this feature does not work in parallel?

Best,

Pablo
Hm. Not sure how thoroughly I tested that feature in parallel. The other case is also decomposed with the same number of processors?
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Old   June 26, 2013, 11:51
Default
  #3
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Pablo Higuera
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Rep Power: 7
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Well, the othercase is actually the same case, so yes, same number of processors.

I also tested the same command for other simulations, with different number of processors, and the error is the same:

Code:
[18] --> FOAM FATAL ERROR: 
[18]  Parser Error for driver FieldValueExpressionDriver at "1.9" :"Foreign mesh other does not have a field named p"
"p-other(p)"
That strange 1.9 again... I'm not sure where it comes from.

Does this command work with a parallel version of the Sarlacc Pit case for you?
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Old   June 26, 2013, 13:00
Default
  #4
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Bernhard Gschaider
Join Date: Mar 2009
Posts: 3,915
Rep Power: 40
gschaider will become famous soon enoughgschaider will become famous soon enough
Quote:
Originally Posted by Phicau View Post
Well, the othercase is actually the same case, so yes, same number of processors.

I also tested the same command for other simulations, with different number of processors, and the error is the same:

Code:
[18] --> FOAM FATAL ERROR: 
[18]  Parser Error for driver FieldValueExpressionDriver at "1.9" :"Foreign mesh other does not have a field named p"
"p-other(p)"
That strange 1.9 again... I'm not sure where it comes from.
1.9 is line 1 column 9 of the input. The p in other()

Quote:
Originally Posted by Phicau View Post
Does this command work with a parallel version of the Sarlacc Pit case for you?
To be honest: I haven't tried.
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