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Old   July 16, 2008, 05:31
Default Problems with wmake
  #1
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Ivan Flaminio Cozza
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Hi to ervybody!
I have this problem with wmake:
when I try to recompile something, i write wmake, but I get this message:


ivan@bombadil:~/OpenFOAM/ivan-1.4.1/run$ wmake
-bash: /opt/OpenFOAM/OpenFOAM-1.4.1/wmake/wmake: Permission denied

What's happen?
Thank you!
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Old   July 16, 2008, 07:24
Default Probably a permissions problem
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Mark Olesen
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Probably a permissions problem if you are in a different group than the owner.

Try "chmod -R a+rX DIRNAME" as the owner (eg, root) and see if that fixes it.

Note that 'X' is in uppercase - this will only add execution permission if it is already set.
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Old   August 13, 2008, 09:44
Default Dear all! I m about to try
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Aram Amouzandeh
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Dear all!

I m about to try understanding OF and its structure and want to see how to compile a new library. Therefore, I copied the kEpsilon turbulence model to the user directory, modified it a bit and changed the name to mykEpsilon (see also 3rd OF training/workshop, Milano). When compiling with the command wmake libso i get the following message:

linuxGccDPOpt/options:5: *** missing separator. Stop.
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/wmake/wmake: cannot make, file Make/linuxGccDPOpt/objectFiles was not created successfully

I was not able to find any hint in the discussion forum so can anybody give me one??

Thanks a lot in advance!

Aram
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Old   August 14, 2008, 16:58
Default The EXE_INC and LIB_LIBS have
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Mattijs Janssens
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The EXE_INC and LIB_LIBS have to be one file or use '\' as continuation symbol. Check that you have '\' and no space after it.
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Old   August 18, 2008, 09:48
Default thx mattijs for your respons!
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Aram Amouzandeh
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thx mattijs for your respons!

i put the EXE_INC and LIB_LIBS in the same file and also used '\' as continuation symbol. The /Make/options file looks like this:

mykEpsilon.C
EXE_LIBS = $(FOAM_USER_LIBBIN)/mylibTurbulenceModel

EXE_INC = \
-I$(LIB_SRC)/finiteVolume/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/thermophysicalModels/basic/lnInclude \
-I$(LIB_SRC)/turbulenceModels/incompressible/lnInclude

producing the following Make/linuxGccDPOpt/options file:

# 1 "options"
# 1 "<built-in>"
# 1 "<command>"
# 1 "options"
mykEpsilon.C
EXE_LIBS = $(FOAM_USER_LIBBIN)/mylibTurbulenceModel

EXE_INC = -I$(LIB_SRC)/finiteVolume/lnInclude -I$(LIB_SRC)/meshTools/lnInclude -I$(LIB_SRC)/thermophysicalModels/basic/lnInclude -I$(LIB_SRC)/turbulenceModels/incompressible/lnInclude

not separating the exe_inc paths. I've no idea why.

Aram
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Old   August 18, 2008, 14:01
Default The mykEpsilon.C should be in
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Mattijs Janssens
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The mykEpsilon.C should be in Make/files, not options. Check any other library.
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Old   August 19, 2008, 04:52
Default Hi everyone, I encountered
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Roberto Biollo
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Hi everyone,

I encountered the following problem using wmake and I don't have a clear understanding of it.
Is perhaps the file gambitToFoam.C missing?
(OF is installed on Ubuntu 7.04)

Thanks a lot in advance!

Roberto


simulation@roberto-desktop:~/OpenFOAM/OpenFOAM-1.4.1/applications/utilities/mesh
/conversion/gambitToFoam$ wmake
Making dependency list for source file gambitToFoam.L
SOURCE=gambitToFoam.L ; flex++ -f $SOURCE ; mv lex.yy.cc Make/linuxGccDPOpt/gamb
itToFoam.C ; g++ -m32 -Dlinux -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unuse
d-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-40 -IlnInclud
e -I. -I/home/simulation/OpenFOAM/OpenFOAM-1.4.1/src/OpenFOAM/lnInclude -fPIC
-pthread -c Make/linuxGccDPOpt/gambitToFoam.C -o Make/linuxGccDPOpt/gambitToFoam
.o
/bin/sh: flex++: not found
mv: cannot stat `lex.yy.cc': No such file or directory
g++: Make/linuxGccDPOpt/gambitToFoam.C: No such file or directory
g++: no input files
make: *** [Make/linuxGccDPOpt/gambitToFoam.o] Error 1
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Old   August 19, 2008, 06:02
Default thx mattijs! wmake compiles no
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Aram Amouzandeh
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thx mattijs! wmake compiles now, and producing plenty errors as it doesn t find header files ... I've to look at it.

thx again for your help!
aram
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Old   August 19, 2008, 11:07
Default dear all!! now I try to imp
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Aram Amouzandeh
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dear all!!

now I try to implement a new bc rampedFixedValueFvPatchField, copied and adjusted from oscillatingFixedValueFvPatchField. after fixing some mistakes while compiling I get an error I'm not able to cope with (see command lines below).

could anybody give me a clue??

thx very much in advance!!

aram

***********************************************

[aa@lws16 icoFoamRamped]$ ll
total 44
-rw-r----- 1 aa e202 1048 2008-08-19 11:03 createFields.H
drwxr-xr-x 4 aa e202 4096 2008-08-19 11:03 FoamX
-rw-r----- 1 aa e202 3293 2008-08-19 11:03 icoFoamRamped.C
drwxr-xr-x 2 aa e202 4096 2008-08-19 16:55 Make
-rw-r----- 1 aa e202 1909 2008-08-19 11:31 oscillatingFixedValueFvPatchFieldsFwd.H
-rw-r----- 1 aa e202 5782 2008-08-19 16:40 rampedFixedValueFvPatchField.C
-rw-r----- 1 aa e202 6223 2008-08-19 16:38 rampedFixedValueFvPatchField.H
-rw-r----- 1 aa e202 1727 2008-08-19 15:57 rampedFixedValueFvPatchFields.C
-rw-r----- 1 aa e202 1867 2008-08-19 15:55 rampedFixedValueFvPatchFields.H
[aa@lws16 icoFoamRamped]$ wmake
Making dependency list for source file icoFoamRamped.C
Making dependency list for source file rampedFixedValueFvPatchFields.C
SOURCE=icoFoamRamped.C ; g++ -m32 -Dlinux -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-40 -I/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude -IlnInclude -I. -I/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/OpenFOAM/lnInclude -fPIC -pthread -c $SOURCE -o Make/linuxGccDPOpt/icoFoamRamped.o
SOURCE=rampedFixedValueFvPatchFields.C ; g++ -m32 -Dlinux -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-40 -I/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude -IlnInclude -I. -I/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/OpenFOAM/lnInclude -fPIC -pthread -c $SOURCE -o Make/linuxGccDPOpt/rampedFixedValueFvPatchFields.o
rampedFixedValueFvPatchField.C: In constructor 'Foam::rampedFixedValueFvPatchField<type>::rampedF ixedValueFvPatchField(const Foam::fvPatch&, const Foam::Field<type>&, const Foam::dictionary&) [with Type = double]':
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fvPatchField.H: 132: instantiated from 'static Foam::tmp<foam::fvpatchfield<type> > Foam::fvPatchField<type>::adddictionaryConstructor ToTable<fvpatchfieldtype>::New (const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::dictionary&) [with fvPatchFieldType = Foam::rampedFixedValueFvPatchField<double>, Type = double]'
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fvPatchField.H: 132: instantiated from 'Foam::fvPatchField<type>::adddictionaryConstructo rToTable<fvpatchfieldtype>:: adddictionaryConstructorToTable(const Foam::word&) [with fvPatchFieldType = Foam::rampedFixedValueFvPatchField<double>, Type = double]'
rampedFixedValueFvPatchFields.C:38: instantiated from here
rampedFixedValueFvPatchField.C:101: error: no matching function for call to 'Foam::fixedValueFvPatchField<double>::fixedValueF vPatchField(const Foam::fvPatch&, const Foam::Field<double>&)'
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:87: note: candidates are: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&, const Foam::DimensionedField<type,>&) [with Type = double]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:76: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&) [with Type = double]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:66: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&, const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::fvPatchFieldMapper&) [with Type = double]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:53: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::dictionary&) [with Type = double]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:41: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fvPatch&, const Foam::DimensionedField<type,>&) [with Type = double]
rampedFixedValueFvPatchField.C: In constructor 'Foam::rampedFixedValueFvPatchField<type>::rampedF ixedValueFvPatchField(const Foam::fvPatch&, const Foam::Field<type>&, const Foam::dictionary&) [with Type = Foam::Vector<double>]':
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fvPatchField.H: 132: instantiated from 'static Foam::tmp<foam::fvpatchfield<type> > Foam::fvPatchField<type>::adddictionaryConstructor ToTable<fvpatchfieldtype>::New (const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::dictionary&) [with fvPatchFieldType = Foam::rampedFixedValueFvPatchField<foam::vector<do uble> >, Type = Foam::Vector<double>]'
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fvPatchField.H: 132: instantiated from 'Foam::fvPatchField<type>::adddictionaryConstructo rToTable<fvpatchfieldtype>:: adddictionaryConstructorToTable(const Foam::word&) [with fvPatchFieldType = Foam::rampedFixedValueFvPatchField<foam::vector<do uble> >, Type = Foam::Vector<double>]'
rampedFixedValueFvPatchFields.C:38: instantiated from here
rampedFixedValueFvPatchField.C:101: error: no matching function for call to 'Foam::fixedValueFvPatchField<foam::vector<double> >::fixedValueFvPatchField(const Foam::fvPatch&, const Foam::Field<foam::vector<double> >&)'
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:87: note: candidates are: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&, const Foam::DimensionedField<type,>&) [with Type = Foam::Vector<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:76: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&) [with Type = Foam::Vector<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:66: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&, const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::fvPatchFieldMapper&) [with Type = Foam::Vector<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:53: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::dictionary&) [with Type = Foam::Vector<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:41: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fvPatch&, const Foam::DimensionedField<type,>&) [with Type = Foam::Vector<double>]
rampedFixedValueFvPatchField.C: In constructor 'Foam::rampedFixedValueFvPatchField<type>::rampedF ixedValueFvPatchField(const Foam::fvPatch&, const Foam::Field<type>&, const Foam::dictionary&) [with Type = Foam::SphericalTensor<double>]':
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fvPatchField.H: 132: instantiated from 'static Foam::tmp<foam::fvpatchfield<type> > Foam::fvPatchField<type>::adddictionaryConstructor ToTable<fvpatchfieldtype>::New (const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::dictionary&) [with fvPatchFieldType = Foam::rampedFixedValueFvPatchField<foam::spherical tensor<double> >, Type = Foam::SphericalTensor<double>]'
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fvPatchField.H: 132: instantiated from 'Foam::fvPatchField<type>::adddictionaryConstructo rToTable<fvpatchfieldtype>:: adddictionaryConstructorToTable(const Foam::word&) [with fvPatchFieldType = Foam::rampedFixedValueFvPatchField<foam::spherical tensor<double> >, Type = Foam::SphericalTensor<double>]'
rampedFixedValueFvPatchFields.C:38: instantiated from here
rampedFixedValueFvPatchField.C:101: error: no matching function for call to 'Foam::fixedValueFvPatchField<foam::sphericaltenso r<double> >::fixedValueFvPatchField(const Foam::fvPatch&, const Foam::Field<foam::sphericaltensor<double> >&)'
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:87: note: candidates are: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&, const Foam::DimensionedField<type,>&) [with Type = Foam::SphericalTensor<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:76: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&) [with Type = Foam::SphericalTensor<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:66: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fixedValueFvPatchField<type>&, const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::fvPatchFieldMapper&) [with Type = Foam::SphericalTensor<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:53: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::dictionary&) [with Type = Foam::SphericalTensor<double>]
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fixedValueFvPat chField.C:41: note: Foam::fixedValueFvPatchField<type>::fixedValueFvPa tchField(const Foam::fvPatch&, const Foam::DimensionedField<type,>&) [with Type = Foam::SphericalTensor<double>]
rampedFixedValueFvPatchField.C: In constructor 'Foam::rampedFixedValueFvPatchField<type>::rampedF ixedValueFvPatchField(const Foam::fvPatch&, const Foam::Field<type>&, const Foam::dictionary&) [with Type = Foam::SymmTensor<double>]':
/home/E202/aa/OpenFOAM/OpenFOAM-1.4.1/src/finiteVolume/lnInclude/fvPatchField.H: 132: instantiated from 'static Foam::tmp<foam::fvpatchfield<type> > Foam::fvPatchField<type>::adddictionaryConstructor ToTable<fvpatchfieldtype>::New (const Foam::fvPatch&, const Foam::DimensionedField<type,>&, const Foam::dictionary&) [with fvPatchFieldType = Foam::rampedFixedValueFvPatchField<foam::symmtenso r<double> >, Type = Foam::SymmTensor<double>]'
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Old   August 20, 2008, 06:31
Default problem solved! aram
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Aram Amouzandeh
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problem solved!

aram
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Old   August 20, 2008, 07:30
Default Hello all, I've got exactly
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Maria Magdalena Poschner
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Hello all,

I've got exactly the same problem as Roberto, when recompiling the combustion library. I think it's not a problem of OpenFOAM itself. I think it arises from the flex++ package which must be treated in any way different by Ubuntu and by SUSE linux.

But I have not yet a solution for that problem. Maybe there is someone who, has had the same problem with OF on Ubuntu.

I would be very grateful to get any hint, what to do.

Thanks a lot!

Maria Magdalena
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Old   January 28, 2011, 12:09
Default
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Mirko Vukovic
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Quote:
Originally Posted by mabinty View Post
problem solved!

aram

Aram,

I know it is a long time, but do you recall how you solved your problem?

I am having a similar one with the oscillatingFixedValue patch (error messages are here.

Thanks,

Mirko
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Old   January 28, 2011, 19:04
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Mirko Vukovic
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Never mind. Problem solved. Sorry for troubling you.
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Old   June 27, 2013, 16:58
Default Problem with bash/su permission
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Arthur Piquet
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Hi,

I have a problem for couple of weeks now. I created some utilities for OpenFOAM for my cases and I compiled them using wmake in 'sudo bash' permission.

On some utilities (the one that I copy/paste from the library), it work perfectly. But for them that I downloaded, I need to be in 'sudo bash' mode to actually see the utilities and execute them.

I can't also wmake my file in normal mode (no sudo bash) and the 'sudo su' doesn't work at all...

It's kind of annoying because all the file that I create in bash mode are protected when I return in normal mode.

I hope it's clear, english is not my mother tong...

Thank you though!
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Old   June 30, 2013, 07:34
Default
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Bruno Santos
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wyldckat is just really nicewyldckat is just really nicewyldckat is just really nicewyldckat is just really nice
Greetings Arthur,

OK, let's address the two issues at hand:
  1. Running commands as sudo (aka as root) should be avoided as much as possible. This is why usually tutorials about creating variants of OpenFOAM source code indicate that we should edit the file "Make/files" and for example, rename "FOAM_APPBIN" to "FOAM_USER_APPBIN". Here's an example of such a tutorial: http://openfoamwiki.net/index.php/Ho...ure_to_icoFoam - as you should see, all commands are performed as normal user and not as root
  2. So your files are read-only or even not accessible as normal user. Then, depending on where the files are, you can do the following steps (as normal user):
    1. Move the files as root to your user folder:
      Code:
      sudo mv /path/to/root/folder/where/files/are $HOME/my/personal/folder
      This you probably only want to do if the files are located at "/root".
    2. Change the user ownership of the files and folders. This can be done with the following command:
      Code:
      sudo chown -R $USER:$USER /path/to/files/or/folder
      Or if your user's group is "users":
      Code:
      sudo chown -R $USER:users /path/to/files/or/folder
And that's the trick!

Best regards,
Bruno
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