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openmpi and "executable not found"

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Old   March 31, 2010, 13:30
Default openmpi and "executable not found"
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Benedikt Goeppner
Join Date: Jan 2010
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Hi everybody,

I was trying to use OpenFOAM with openmpi, but got some problemes I cannot solve by myself...

That's the situation:
  • I've got several computers connected by a server, all computers have installed openldap for user-authentification and mount centralized home-directories via nfs.
  • OpenFOAM is installed in my home-directory like suggested in official installation tutorial.
  • I can run openfoam-applications on each of those computers no matter if I log in via desktop or ssh, no problem here.The .bashrc seems to be set correctly therefore.
  • I can run openfoam-applications via mpirun if I stay local (using multiple cores on one computer, without --hostfile or --host parameter) Openmpi seems to be installed correctly therefore.
  • I can run openmpi on multiple computers, say mpirun -np 2 --host localhost,remotehost uptime.
  • Running mpirun -np 2 --host localhost,remotehost echo $SHELL returns /bin/bash on all nodes.
  • Running mpirun -np 2 --host localhost,remotehost echo $PATH returns the same path-environment for both computers.
But if I try to run an openfoam-application via mpirun on a remote computers, I'm getting an "executable not found" error... How can that be? The executable is found if I'm logging in interactivly, and path is set correct even if I log in via mpirun...

Any suggestion would be great, I'm really frustrated right now...


Thanks and have a nice Easter Weekend,
Ben
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Old   April 1, 2010, 07:51
Default Missing environment variables?
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Christian Kröner
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Location: Bonn
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Hi,

i think you need to export the necessary environment variables to the remote nodes:

The man pages of mpirun says:

-x <env> Export the specified environment variables to the remote
nodes before executing the program.

I do not know if it is necessary, but i need to specify the following environment variables:

mpirun -x PATH -x LD_LIBRARY_PATH -x WM_PROJECT_INST_DIR -x WM_PROJECT_DIR -x MPI_BUFFER_SIZE --host host1,host2 interFoam -parallel

ckroener
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