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[OpenFOAM.org] Installing OpenFoam 3.0.1 on cluster |
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Alpha
Join Date: Dec 2013
Posts: 2
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I'm trying to install OpenFoam 3.0.1 on a scientific linux cluster.
I've compiled the Third party section (except for paraview). I'm using the openmpi in this folder and had to compile gcc-5.3.0 because the version on the cluster was too old. Running the following gives Code:
#ldd /home/ashep/OpenFOAM/OpenFOAM-3.0.1/platforms/linux64Gcc51DPInt32Opt/lib/libOpenFOAM.so
linux-vdso.so.1 => (0x00007ffff7ffe000)
libPstream.so => not found
libz.so.1 => /lib64/libz.so.1 (0x00007ffff73fc000)
libstdc++.so.6 => /home/ashep/OpenFOAM/ThirdParty-3.0.1/platforms/linux64/gcc-5.3.0/lib64/libstdc++.so.6 (0x00007ffff706e000)
libm.so.6 => /lib64/libm.so.6 (0x00007ffff6dea000)
libgcc_s.so.1 => /home/ashep/OpenFOAM/ThirdParty-3.0.1/platforms/linux64/gcc-5.3.0/lib64/libgcc_s.so.1 (0x00007ffff6bd3000)
libc.so.6 => /lib64/libc.so.6 (0x00007ffff6832000)
/lib64/ld-linux-x86-64.so.2 (0x0000003685600000)
Code:
Checking basic setup...
-------------------------------------------------------------------------------
Shell: bash
Host: secluster
OS: Linux version 2.6.32-220.2.1.el6.x86_64
-------------------------------------------------------------------------------
Checking main OpenFOAM env variables...
-------------------------------------------------------------------------------
Environment_variable Set_to_file_or_directory Valid Crit
-------------------------------------------------------------------------------
$WM_PROJECT_INST_DIR /home/ashep/OpenFOAM yes yes
$WM_PROJECT_USER_DIR /home/ashep/OpenFOAM/ashep-3.0.1 no no
$WM_THIRD_PARTY_DIR /home/ashep/OpenFOAM/ThirdParty-3.0.1 yes yes
-------------------------------------------------------------------------------
Checking the OpenFOAM env variables set on the PATH...
-------------------------------------------------------------------------------
Environment_variable Set_to_file_or_directory Valid Path Crit
-------------------------------------------------------------------------------
$WM_PROJECT_DIR /home/ashep/OpenFOAM/OpenFOAM-3.0.1 yes yes yes
$FOAM_APPBIN ...1/platforms/linux64GccDPInt32Opt/bin no yes
$FOAM_SITE_APPBIN ...1/platforms/linux64GccDPInt32Opt/bin no no
$FOAM_USER_APPBIN ...1/platforms/linux64GccDPInt32Opt/bin no no
$WM_DIR .../ashep/OpenFOAM/OpenFOAM-3.0.1/wmake yes yes yes
-------------------------------------------------------------------------------
Checking the OpenFOAM env variables set on the LD_LIBRARY_PATH...
-------------------------------------------------------------------------------
Environment_variable Set_to_file_or_directory Valid Path Crit
-------------------------------------------------------------------------------
$FOAM_LIBBIN ...1/platforms/linux64GccDPInt32Opt/lib no yes
$FOAM_SITE_LIBBIN ...1/platforms/linux64GccDPInt32Opt/lib no no
$FOAM_USER_LIBBIN ...1/platforms/linux64GccDPInt32Opt/lib no no
$MPI_ARCH_PATH .../platforms/linux64Gcc/openmpi-1.10.0 yes no yes
-------------------------------------------------------------------------------
Third party software
-------------------------------------------------------------------------------
Software Version Location
-------------------------------------------------------------------------------
flex 2.5.35 /usr/bin/flex
gcc 5.3.0 /home/ashep/OpenFOAM/ThirdParty-3.0.1/gcc-5.3.0/bin/gcc
g++ 5.3.0 /home/ashep/OpenFOAM/ThirdParty-3.0.1/gcc-5.3.0/bin/g++
gzip 1.3.12 /bin/gzip
tar 1.23 /bin/tar
icoFoam
WARNING: Conflicting installations:
OpenFOAM settings : /home/ashep/OpenFOAM/OpenFOAM-3.0.1/platforms/linux64GccDPInt32Opt/bin/icoFoam
current path :
CRITICAL ERROR
-------------------------------------------------------------------------------
Summary
-------------------------------------------------------------------------------
Base configuration ok.
The foam installation contains 1 critical error(s).
Review the output for warning messages and consult
the installation guide for troubleshooting.
Done
Last edited by hello177; April 24, 2016 at 09:36. |
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#2 |
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New Member
Alpha
Join Date: Dec 2013
Posts: 2
Rep Power: 0 ![]() |
Ok, turns out I'd forgotten to change bashrc to not use the system compiler
![]() Seems to have compiled fine now. |
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