[OpenFOAM.org] cmake: command not found

ali_kerem · July 4, 2018, 10:05

Hello Everyone,

I'm trying to install OpenFoam-5.0 and ThirdParty-5.0 on Centos 7.5 x86_64.
I'm trying to follow this guide -> https://openfoamwiki.net/index.php/I...CentOS_SL_RHEL

2.2 CentOS 7.4 (1708), after step 8 when I try to do step 9 it gives error about cmake;

./makeCGAL: line 274: cmake: command not found

when I try to do step 8 again it gives this output;

$ ./makeCmake
---------------
Already built: cmake-3.9.0

how to break this paradox?

fertinaz · July 4, 2018, 16:20

Did you refresh your bash environment by

Code:

wmRefresh

ali_kerem · July 5, 2018, 01:15

that does not change anything

fertinaz · July 5, 2018, 03:28

Try appending cmake/bin folder to your $PATH manually then. But this is weird.

olesen · July 5, 2018, 07:59

Quote:

Originally Posted by ali_kerem

Hello Everyone,

I'm trying to install OpenFoam-5.0 and ThirdParty-5.0 on Centos 7.5 x86_64.
I'm trying to follow this guide -> https://openfoamwiki.net/index.php/I...CentOS_SL_RHEL

2.2 CentOS 7.4 (1708), after step 8 when I try to do step 9 it gives error about cmake;

./makeCGAL: line 274: cmake: command not found

when I try to do step 8 again it gives this output;

$ ./makeCmake
---------------
Already built: cmake-3.9.0

how to break this paradox?

See what "makeCGAL -help" tells you, perhaps it has a -cmake option too. In the 1712, 1806 versions (maybe earlier too) this will also examine the platforms/ directories when trying to resolve a particular cmake version.

/mark

ali_kerem · July 5, 2018, 09:43

Quote:

Originally Posted by fertinaz

Try appending cmake/bin folder to your $PATH manually then. But this is weird.

after changing .bash_profile and trying again, it acts like CGAL installed I think but there is no makeCGAL step or anything in the guide or should i follow Centos 6.9 guide?

Code:

== Detect external libraries ==
-- External libraries supported: GMP;GMPXX;MPFR;ZLIB;OpenGL;LEDA;MPFI;RS;RS3;OpenNL;Eigen3;BLAS;LAPACK;QGLViewer;ESBTL;Coin3D;NTL;IPE
-- Preconfiguring library: GMP ...
-- Could NOT find GMP (missing: GMP_LIBRARIES GMP_INCLUDE_DIR)
CMake Error at cmake/modules/CGAL_SetupDependencies.cmake:66 (message):
  CGAL requires GMP to be found
Call Stack (most recent call first):
  CMakeLists.txt:681 (include)


-- Configuring incomplete, errors occurred!
See also "/home/aero/OpenFOAM/ThirdParty-5.0/build/linux64Gcc/CGAL-4.10/CMakeFiles/CMakeOutput.log".
+ exit 1

CMakeOutput.log doesn't have anything includes error

Quote:

Originally Posted by olesen

See what "makeCGAL -help" tells you, perhaps it has a -cmake option too. In the 1712, 1806 versions (maybe earlier too) this will also examine the platforms/ directories when trying to resolve a particular cmake version.

/mark

makeCGAL -help does not help because it doesn't exist and I think makeCGAL step is missing in Centos 7.4 guide

wyldckat · August 17, 2018, 16:02

Greetings to all!

I'm late to this, but the problem with CMake is that OpenFOAM 5.0 had a bug in the file "etc/config.sh/paraview", which was reported here: https://bugs.openfoam.org/view.php?id=2648
This is also why I wrote the instructions at openfoamwiki to use 5.x instead of 5.0

If this is still a problem, then download this file https://github.com/OpenFOAM/OpenFOAM...ig.sh/paraview and replace the one at ... bah, here is the commands that do this for you:

Code:

mv $WM_PROJECT_DIR/etc/config.sh/paraview $WM_PROJECT_DIR/etc/config.sh/paraview.50
wget https://raw.githubusercontent.com/OpenFOAM/OpenFOAM-5.x/master/etc/config.sh/paraview -O $WM_PROJECT_DIR/etc/config.sh/paraview

wmRefresh

With this cmake is ready to be used.

As for the problem with CGAL, my guess is that it could be because the packages "mpfr-devel gmp-devel" were not installed or because the wrong CMake version was being used...

@ali_kerem: If you still have this issue and want to fix it, please let us know.

Best regards,
Bruno

vivek05 · January 8, 2019, 12:55

Hi

Quote:

Originally Posted by wyldckat

Greetings to all!
[CODE]mv $WM_PROJECT_DIR/etc/config.sh/paraview $WM_PROJECT_DIR/etc/config.sh/paraview.50
wget https://raw.githubusercontent.com/OpenFOAM/OpenFOAM-5.x/master/etc/config.sh/paraview -O $WM_PROJECT_DIR/etc/config.sh/paraview

I am also facing same kind of error despite following the above steps.

when making ./makeCGAL

PHP Code:


			
removing old build directory

    /home/vvmk/OpenFOAM/ThirdParty-5.0/build/linux64Gcc48/CGAL-4.10

----

Configuring CGAL-4.10 with boost 105500

    Source         : /home/vvmk/OpenFOAM/ThirdParty-5.0/CGAL-4.10

    Build          : /home/vvmk/OpenFOAM/ThirdParty-5.0/build/linux64Gcc48/CGAL-4.10

    Target         : /home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/CGAL-4.10

    ThirdParty     : boost

    ThirdParty     : gmp/mpfr

----

+ cmake -DCMAKE_INSTALL_PREFIX=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/CGAL-4.10 -DCMAKE_BUILD_TYPE=Release -DWITH_CGAL_Qt5=OFF -DBoost_INCLUDE_DIR=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/boost_1_55_0/include -DBoost_LIBRARY_DIRS=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/boost_1_55_0/lib -DBoost_THREAD_LIBRARY=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/boost_1_55_0/lib/libboost_thread.so -DBoost_THREAD_LIBRARY_RELEASE=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/boost_1_55_0/lib/libboost_thread.so -DBoost_SYSTEM_LIBRARY=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/boost_1_55_0/lib/libboost_system.so -DBoost_SYSTEM_LIBRARY_RELEASE=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64Gcc48/boost_1_55_0/lib/libboost_system.so -DBoost_VERSION=105500 -DGMP_INCLUDE_DIR=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/gmp-5.1.2/include -DGMP_LIBRARIES_DIR=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/gmp-5.1.2/lib64 -DGMP_LIBRARIES=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/gmp-5.1.2/lib64/libgmp.so -DGMPXX_INCLUDE_DIR=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/gmp-5.1.2/include -DGMPXX_LIBRARIES=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/gmp-5.1.2/lib64/libgmpxx.so -DMPFR_INCLUDE_DIR=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/mpfr-3.1.2/include -DMPFR_LIBRARIES_DIR=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/mpfr-3.1.2/lib64 -DMPFR_LIBRARIES=/home/vvmk/OpenFOAM/ThirdParty-5.0/platforms/linux64/mpfr-3.1.2/lib64/libmpfr.so /home/vvmk/OpenFOAM/ThirdParty-5.0/CGAL-4.10

./makeCGAL: line 274: cmake: command not found

+ exit 1

could you clarify this?

wyldckat · January 8, 2019, 16:56

Quote:

Originally Posted by vivek05

could you clarify this?

Quick questions:

Which installation instructions are you following?
Which Linux Distribution are you using?

vivek05 · January 8, 2019, 19:27

Thanks Bruno for reply

I am trying to install OpenFOAM-5.0 in my hpc account.
I am using Red Hat Enterprise Linux

----
Sorry for the typo

*hpc account

wyldckat · January 9, 2019, 17:26

Quick question: Which version of Redhat Enterprise Linux? If you don't know how to find out, run the following command:

Code:

uname -a

vivek05 · January 10, 2019, 03:28

Quote:

Originally Posted by wyldckat

Quick question: Which version of Redhat Enterprise Linux? If you don't know how to find out, run the following command:

Code:

uname -a

Thanks Bruno!!

Finally installed OpenFoam 5.0
Error was due to Cmake compilation
After compiling Cmake , I executed ./makeCGAL it's done without any error

Monrah · September 3, 2019, 15:27

Quote:

Originally Posted by vivek05

Thanks Bruno!!

Finally installed OpenFoam 5.0
Error was due to Cmake compilation
After compiling Cmake , I executed ./makeCGAL it's done without any error

How did you compile cmake?
I've used ./makeCmake command to build the cmake3.9.0. After the it is showing that cmake is build, if I use commands like make, then it says that cmake-3.9.0 is already built.
But when I use ./makeCGAL then it says that cmake command not found.
What should I do to compile cmake successfully? And I am installing openfoam5.0 on my lab cluster.

Any help regarding this?

July 4, 2018, 10:05	cmake: command not found	#1
ali_kerem New Member Join Date: Jul 2018 Posts: 3 Rep Power: 7	Hello Everyone, I'm trying to install OpenFoam-5.0 and ThirdParty-5.0 on Centos 7.5 x86_64. I'm trying to follow this guide -> https://openfoamwiki.net/index.php/I...CentOS_SL_RHEL 2.2 CentOS 7.4 (1708), after step 8 when I try to do step 9 it gives error about cmake; ./makeCGAL: line 274: cmake: command not found when I try to do step 8 again it gives this output; $ ./makeCmake --------------- Already built: cmake-3.9.0 how to break this paradox?

July 4, 2018, 16:20		#2
fertinaz Member Fatih Ertinaz Join Date: Feb 2011 Location: Istanbul Posts: 64 Rep Power: 15	Did you refresh your bash environment by Code: wmRefresh

August 17, 2018, 16:02		#7
wyldckat Retired Super Moderator Bruno Santos Join Date: Mar 2009 Location: Lisbon, Portugal Posts: 10,975 Blog Entries: 45 Rep Power: 128	Greetings to all! I'm late to this, but the problem with CMake is that OpenFOAM 5.0 had a bug in the file "etc/config.sh/paraview", which was reported here: https://bugs.openfoam.org/view.php?id=2648 This is also why I wrote the instructions at openfoamwiki to use 5.x instead of 5.0 If this is still a problem, then download this file https://github.com/OpenFOAM/OpenFOAM...ig.sh/paraview and replace the one at ... bah, here is the commands that do this for you: Code: mv $WM_PROJECT_DIR/etc/config.sh/paraview $WM_PROJECT_DIR/etc/config.sh/paraview.50 wget https://raw.githubusercontent.com/OpenFOAM/OpenFOAM-5.x/master/etc/config.sh/paraview -O $WM_PROJECT_DIR/etc/config.sh/paraview wmRefresh With this cmake is ready to be used. As for the problem with CGAL, my guess is that it could be because the packages "mpfr-devel gmp-devel" were not installed or because the wrong CMake version was being used... @ali_kerem: If you still have this issue and want to fix it, please let us know. Best regards, Bruno __________________ OpenFOAM: FAQ \| Getting started Forum: How to get help, to post code/output and forum guide Read this before sending me PM

January 8, 2019, 19:27		#10
vivek05 Member Vivek Join Date: Mar 2018 Location: India Posts: 54 Rep Power: 8	Thanks Bruno for reply I am trying to install OpenFOAM-5.0 in my hpc account. I am using Red Hat Enterprise Linux ---- Sorry for the typo hpc account Last edited by wyldckat; January 9, 2019 at 17:24. Reason: merged posts a few minutes apart*

January 9, 2019, 17:26		#11
wyldckat Retired Super Moderator Bruno Santos Join Date: Mar 2009 Location: Lisbon, Portugal Posts: 10,975 Blog Entries: 45 Rep Power: 128	Quick question: Which version of Redhat Enterprise Linux? If you don't know how to find out, run the following command: Code: uname -a

July 5, 2018, 01:15		#3
ali_kerem New Member Join Date: Jul 2018 Posts: 3 Rep Power: 7	that does not change anything

July 5, 2018, 03:28		#4
fertinaz Member Fatih Ertinaz Join Date: Feb 2011 Location: Istanbul Posts: 64 Rep Power: 15	Try appending cmake/bin folder to your $PATH manually then. But this is weird.

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