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[OpenFOAM.org] OpenFOAM and FDS incompatible on Ubuntu |
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June 20, 2019, 00:34 |
OpenFOAM and FDS incompatible on Ubuntu
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#1 |
New Member
Gareth
Join Date: Apr 2010
Location: Sydney Aus
Posts: 14
Rep Power: 16 |
Hello everyone,
I have been using Openfoam v6 fine on my Ubuntu 16.04. Until recently, I had to install Fire Dynamics Simulator (FDS) on the same machine, and Openfoam gives the following issue: gharek@davinci:~$ blockMesh blockMesh: symbol lookup error: /opt/openfoam6/platforms/linux64GccDPInt32Opt/lib/openmpi-system/libPstream.so: undefined symbol: ompi_mpi_op_sum Checking the openMPI library directory gives the following: gharek@davinci:~$ ldd $FOAM_LIBBIN/openmpi-system/libPstream.so linux-vdso.so.1 => (0x00007ffd911e6000) libmpi.so.12 => /opt/FDS/FDS6/bin/INTEL/mpi/intel64/lib/release/libmpi.so.12 (0x00007f3a0f0fd000) libstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007f3a0ed7b000) libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f3a0ea72000) libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007f3a0e85c000) libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f3a0e63f000) libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f3a0e275000) librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007f3a0e06d000) libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007f3a0de69000) libfabric.so.1 => /opt/FDS/FDS6/bin/INTEL/mpi/intel64/libfabric/lib/libfabric.so.1 (0x00007f3a0dc30000) /lib64/ld-linux-x86-64.so.2 (0x00007f3a1259a000) The output above show that libmpi.so.12 is pointed towards the FDS intel library, which I do not want to use. Does anyone have any idea how to resolve this issue? I have tried to add the following line in my .bashrc, but this does not work: export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib/openmpi/lib/ Any suggestions or ideas? Please thanks. Gary |
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June 24, 2019, 16:06 |
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#2 |
Retired Super Moderator
Bruno Santos
Join Date: Mar 2009
Location: Lisbon, Portugal
Posts: 10,974
Blog Entries: 45
Rep Power: 128 |
Quick answer: I saw that you also asked this on the FSD mailing list: https://groups.google.com/forum/#!ms...s/eqDurDACBQAJ
You can easily separate shell environments (namely in one terminal only use OpenfOAM and in another use FDS) by following the instructions given here: https://openfoamwiki.net/index.php/I...nFOAM_versions
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June 24, 2019, 20:10 |
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#3 |
New Member
Gareth
Join Date: Apr 2010
Location: Sydney Aus
Posts: 14
Rep Power: 16 |
Hi wyldckat,
Thanks for your reply. This issue has been resolved as per your kind suggestion. Gary |
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