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[mesh manipulation] transformPoints and rotateMesh

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Old   March 31, 2011, 04:51
Default transformPoints and rotateMesh
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hi at all!
i have a mesh which i would like to translate and rotate so that the coordinate system is in the middle of the inlet (nearly a circle) and the z-axis should be normal to the inlet surface.

when i read in just the inlet i get the following coordinates:
Bounds:
X Range: 0.00153 to 0.00418 (delta: 0.0026)
Y Range: 0.159 to 0.16 (delta: 0.00179)
Z Range: -0.218 to 0.216 (delta: 0.00212)

does anyone know how i can accomplish my aim with the utilities transformPoints -translate and rotateMesh?

with regards!
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Old   March 31, 2011, 07:12
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Hi bephi,

simple way to get the center:
x_c = 0.5 * (0.00153 + 0.00418)
y_c = 0.5 * (0.159 + 0.16)
z_c = 0.5 * (-0.218 to 0.216)

Test in paraview:
- Just import "inlet"-patch
- Sources->Sphere
- insert x_c, y_c and z_c in "Center"
- "Radius" = 0.00005

More exact way:
- import "inlet" patch into paraview
- File->Save Data, "Files of type: .csv"
- FieldAssociation "Points"
- Import the .csv-file into OpenOffice Calc
- use "AVERAGE" function for each column

Result is: (0.002850023 0.159609 -0.2167553)
Check in paraview as described above.

Move mesh with:
Code:
transformPoints -translate "(-0.002850023 -0.159609 +0.2167553)"
Rotation:
The surface normal is "0.004016555 0.7621565 0.647346". Desired direction is "0 0 -1".
Code:
rotateMesh "(0.004016555 0.7621565 0.647346)" "(0 0 -1)"
That's it...

Have fun

Martin
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Old   March 31, 2011, 07:50
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Thank you very much! Everything worked fine! I always used a wrong normal vector! Now the mesh is like its supposed to be!
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Old   December 10, 2011, 22:07
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Hi

I like to move my all cells of my mesh only by dx/2 and dy/2 and create a new mesh. Could you please help me how to apply transform mesh command to create a new mesh whose cells are moved by dx/2 and dy/2 relative to the first mesh?

Thanks a lot

Ehsan
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Old   February 14, 2013, 00:14
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Ali Khalifesoltani
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Hi all,

I want to rotate my primary mesh block(around x axis) that is produced by blockMesh to align it with my STL file, but when I run:
Code:
rotateMesh "(0 1 0)" "(0 0 1)"
the following error appears:
Code:
/*---------------------------------------------------------------------------*\
| =========                 |                                                 |
| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
|  \\    /   O peration     | Version:  2.1.1                                 |
|   \\  /    A nd           | Web:      www.OpenFOAM.org                      |
|    \\/     M anipulation  |                                                 |
\*---------------------------------------------------------------------------*/
Build  : 2.1.1-221db2718bbb
Exec   : rotateMesh (0 1 0) (0 0 1)
Date   : Feb 14 2013
Time   : 08:36:43
Host   : "Ali-Laptop"
PID    : 3307
Case   : /home/ali/OpenFOAM/ali-2.1.1/run/tutorials/mesh/snappyHexMesh/wigleyTutor
nProcs : 1
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Disallowing user-supplied system call operations

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Writing points into directory "/home/ali/OpenFOAM/ali-2.1.1/run/tutorials/mesh/snappyHexMesh/wigleyTutor/constant/polyMesh"



--> FOAM FATAL ERROR: 
No times selected

    From function rotateMesh
    in file db/Time/timeSelector.C at line 257.

FOAM exiting
when I don't rotate my mesh block and run SHM, then I can rotate the generated mesh but the rotation before final mesh generation is not possible. Can anybody help me?

Regards,
Ali
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Old   February 14, 2013, 01:44
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Nima Samkhaniani
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Dear Ali

you can use following command
Code:
transformPoints -rotate  '( (0 1 0) (0 0 1) )'
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Old   February 14, 2013, 02:18
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Ali Khalifesoltani
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Thanks for the reply Nima.
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Old   July 31, 2013, 10:21
Default rotate
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Hi namasam
I want to rotat airfoil without rotated mesh. and using simplefoam in Different angles of attack
please can you help me?
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Old   July 31, 2013, 10:24
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Nima Samkhaniani
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its impossible to rotate airfoil but! fixed the mesh :P
you may want to change the direction of inlet velocity
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Old   August 13, 2013, 05:13
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Illya Shevchuk
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Hi,

short & simple question: how to use the transformPoints utility from a custom directory?
Example:
Code:
transformPoints  -roots sourceDir/sourceCase -case targetDir/targetCase -scale "(2.0 2.0 2.0)"
returns error:
Quote:
--> FOAM FATAL ERROR:
bool IPstream::init(int& argc, char**& argv) : attempt to run parallel on 1 processor

From function UPstream::init(int& argc, char**& argv)
in file UPstream.C at line 81.

FOAM aborting
I suppose, that the -roots option is the wrong one, isn't? But in the options list I don't see any suitable option, to specify the root dir:
Quote:
Usage: transformPoints [OPTIONS]
options:
-case <dir> specify alternate case directory, default is the cwd
-noFunctionObjects do not execute functionObjects
-parallel run in parallel
-region <name> specify alternative mesh region
-rollPitchYaw <vector> transform in terms of '(roll pitch yaw)' in degrees
-roots <(dir1 .. dirN)> slave root directories for distributed running
-rotate <(vectorA vectorB)> transform in terms of a rotation between <vectorA> and <vectorB> - eg, '( (1 0 0) (0 0 1) )'
-rotateFields read and transform vector and tensor fields too
-scale <vector> scale by the specified amount - eg, '(0.001 0.001 0.001)' for a uniform [mm] to [m] scaling
-translate <vector> translate by the specified <vector> - eg, '(1 0 0)'
-yawPitchRoll <vector> transform in terms of '(yaw pitch roll)' in degrees
-srcDoc display source code in browser
-doc display application documentation in browser
-help print the usage

Using: OpenFOAM-2.1.x (see www.OpenFOAM.org)
Build: 2.1.x-c1330db6b6e8
Something like -root instead of -roots would be the right option. I also tried
Code:
transformPoints  sourceDir/sourceCase targetDir/targetCase -scale "(2.0 2.0 2.0)"
, but it seems I have to provide options, since the error is:
Quote:
--> FOAM FATAL ERROR:
Wrong number of arguments, expected 0 found 2
Best regards,
Ilya
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Old   August 13, 2013, 05:41
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maybe you want to choose -case
Quote:
transformPoints -case <write your path> -scale '(2.0 2.0 2.0)'
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Old   August 13, 2013, 07:28
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Illya Shevchuk
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Ah ok,

it works, thanks. For that, I have to copy the mesh from the source to the target first. I was just irritated by the Hrvoje's post:
Quote:
Originally Posted by hjasak View Post
Try something like:

transformPoints <root> <case> -scale "(1e-3 1e-3 1e-3)"


Enjoy,

Hrv
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Old   October 2, 2013, 09:07
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hi
i typed following and got an error
Code:
transformPoints -scale (1000 1000 1000)
.
before, i done blockmesh and snappyhexmesh.

the problem, the stl points will be interpreted as meters, but should be millimeters.

the error:
Code:
Wrong number of arguments, expectet 0 found 2
typed it in the case folder.
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Old   October 2, 2013, 09:39
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Dear Porisel

you are trying to use the wrong command!

the transformPoints command is used to transform an existing
mesh which has been created with sHM or blockMesh.

In order to transform your stl file however you need the command:

surfaceTransformPoints

to see how it works type: surfaceTransformPoints -help

To get more insight on the commands available and what to use
them for have a look at the documentation of OpenFoam
chapter 3.6 where you find a detailed list of all utilities.

regards
Colin
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Old   October 2, 2013, 09:45
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Hi colinB,
thank you for your answer.
i already have generated the mesh with blockmesh and snappyhexmesh. now i want to scale the whole mesh, because i dont want to have exorbitant velocity and pressure values

but i will try surfaceTransformpoints.

kind regards,
Porisel
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Old   October 2, 2013, 10:25
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Oh sorry I misunderstood your post:

"before, i done blockmesh and snappyhexmesh."

the error then is that you forgot the inverted commas around your vector
so the correct command reads:

transformPoints -scale '(1000 1000 1000)'

maybe you also have to add a source file and a target file
(I'm not sure, but for surfaceTransformPoints you have to do so)

regards
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Old   October 7, 2013, 02:56
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with inverted commas it dont work, too. but with quotationmarks it works well.
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Old   July 12, 2016, 10:46
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Hi to all,

i tried to change my coordinate system. At the moment it is in the inlet, I tried to move it in the outlet at a waterlevel of 0.85. So i used

transformPoints -translate (15 0 0.85) But the only thing thats changed is that my mesh moved 15 m in x direction and 0.85 m in the z direction. The coordinate system remains the same. (Pictures)

Can someone fix my problem?

Tanks
Attached Images
File Type: png origin_mesh.png (6.5 KB, 56 views)
File Type: png origin_mesh_2.png (5.1 KB, 38 views)
File Type: png Changed_Mesh.png (6.9 KB, 31 views)
File Type: png Changed_Mesh_2.png (5.2 KB, 31 views)
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Old   July 12, 2016, 11:49
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Madeleine
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ok i found my mistake, i move it into the negative way (- 15 0 -0.85) Then it's Zero in the outlet.

But now i want to do setFields again. But i didn't work anymore? But why? I doesnt write in the alpha.water file and dont make a box in my case. Isnt it allowd to do setFields after transform points?
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Old   October 19, 2016, 13:01
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Small q: can i rotate a zone?
The utility says i can rotate a region but i would like to rotate a cell zone...

Any advice
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