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reconstructPar and reconstructParMesh

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Old   June 3, 2015, 05:55
Default reconstructPar and reconstructParMesh
  #1
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Londo
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Hello all

I am trying to reconstruct a case that I ran in parallel. If I run just "reconstructPar" it runs, but it return rubbish - the reconstructed case produces some weird results, and it can be seen that the reconstruction was not done in a proper way.

So I tried to run "reconstructParMesh" and then "reconstructPar". In this case I am getting the following error when I am trying to run reconstructPar:

Code:
Reconstructing volVectorFields

        U

Reconstructing point fields



--> FOAM FATAL ERROR: 
Incomplete patch point addressing

    From function pointFieldReconstructor::pointFieldReconstructor(
    const pointMesh& mesh,
    const PtrList<pointMesh>& procMeshes,
    const PtrList<labelIOList>& pointProcAddressing,
    const PtrList<labelIOList>& boundaryProcAddressing
)
    in file pointFieldReconstructor.C at line 96.

FOAM aborting

#0  Foam::error::printStack(Foam::Ostream&) at ??:?
#1  Foam::error::abort() at ??:?
#2  Foam::pointFieldReconstructor::pointFieldReconstructor(Foam::pointMesh const&, Foam::PtrList<Foam::pointMesh> const&, Foam::PtrList<Foam::IOList<int> > const&, Foam::PtrList<Foam::IOList<int> > const&) at ??:?
#3  
 at ??:?
#4  __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6"
#5  
 at ??:?
Aborted (core dumped)
I am somewhat lost. I am using OF2.1.1. Any ideas about how I can reconstruct the case properly?
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Old   June 3, 2015, 06:31
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Alex
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Can you please let us know how you decomposed the case? If you ran an Allrun script, can you post it here so that we can have a better knowledge about your case?
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Old   June 3, 2015, 10:00
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Londo
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First I run decomposePar. I run it with 4 subdomains, hierarchical method, n (4 1 1). Then I run renumberMesh. After that I run the solver using mpi run and 4 processors.
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Old   December 6, 2015, 20:24
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Fengjiao Bian
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Hi,Londo! I meet the same problem,the provious processes seems to be ok with no error and warning.Did you solver this problem?
Quote:
Originally Posted by Londo View Post
First I run decomposePar. I run it with 4 subdomains, hierarchical method, n (4 1 1). Then I run renumberMesh. After that I run the solver using mpi run and 4 processors.
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Old   March 20, 2018, 07:23
Default Same Error
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Shafik Walakaka
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Anyone solved this issue yet?

I am receiving the same error and my blockmeshDict and my decomposeParDict is attached below.

BlockMeshDict
************************************************** *********************************

/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 4.1 |
| \\ / A nd | Web: www.OpenFOAM.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object blockMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

convertToMeters 0.001;

vertices
(
(0 0 0) //point 0
(20000 0 0) //point 1
(20000 39.8101 0) //point 2
(0 39.8101 0) //point 3
(0 0 39.8101) //point 4
(20000 0 39.8101) //point 5
(20000 39.8101 39.8101) //point 6
(0 39.8101 39.8101) //point 7

(0 11.066 11.066) //point 8
(20000 11.066 11.066) //point 9
(20000 28.744 11.066) //point 10
(0 28.744 11.066) //point 11
(0 11.066 28.744) //point 12
(20000 11.066 28.744) //point 13
(20000 28.744 28.744) //point 14
(0 28.744 28.744) //point 15

(0 2.82843 2.82843) //point 16
(20000 2.82843 2.82843) //point 17
(20000 36.9817 2.82843) //point 18
(0 36.9817 2.82843) //point 19
(0 2.82843 36.9817) //point 20
(20000 2.82843 36.9817) //point 21
(20000 36.9817 36.9817) //point 22
(0 36.9817 36.9817) //point 23
);

blocks
(
hex (20 21 22 23 4 5 6 7) (700 15 1) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 0 (top, outside)
hex (16 17 21 20 0 1 5 4) (700 15 1) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 1 (right, outside)
hex (23 22 18 19 7 6 2 3) (700 15 1) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 2 (left, outside)
hex (19 18 17 16 3 2 1 0) (700 15 1) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 3 (bottom, outside)
hex (8 9 10 11 12 13 14 15) (700 15 15) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 4 (middle)
hex (12 13 14 15 20 21 22 23) (700 15 15) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 5 (top,inside)
hex (8 9 13 12 16 17 21 20) (700 15 15) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 6 (right, inside)
hex (15 14 10 11 23 22 18 19) (700 15 15) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 7 (left, inside)
hex (11 10 9 8 19 18 17 16) (700 15 15) simpleGrading (
(
(0.2 0.65 1) //20% xdir 65%cells expansion=1
(0.8 0.35 10) //80% xdir 35cells expansion=10
)
1 1) //block 8 (bottom inside)
);

edges
(
arc 0 4 (0 -8.245 19.905)
arc 3 7 (0 48.055 19.905)
arc 0 3 (0 19.905 -8.245)
arc 4 7 (0 19.905 48.055)

arc 1 5 (20000 -8.245 19.905)
arc 2 6 (20000 48.055 19.905)
arc 1 2 (20000 19.905 -8.245)
arc 5 6 (20000 19.905 48.055)

arc 16 20 (0 -4.245 19.905)
arc 19 23 (0 44.055 19.905)
arc 16 19 (0 19.905 -4.245)
arc 20 23 (0 19.905 44.055)
arc 17 21 (20000 -4.245 19.905)
arc 18 22 (20000 44.055 19.905)
arc 17 18 (20000 19.905 -4.245)
arc 21 22 (20000 19.905 44.055)
);

boundary
(
inlet //patch name
{
type patch; //patch 0
faces
(
(8 12 15 11) //inlet middle block face
(12 20 23 15) //top block face, inner
(20 4 7 23) //top outer block face
(16 20 12 8) // right block face, innter
(0 4 20 16) // right block face, outer
(11 15 23 19) // left block face, inner
(19 23 7 3) // left block face, outer
(16 8 11 19) // bottom block face, inner
(0 16 19 3) // bottom block face, outer
);
}
outlet
{
type patch;
faces
(
(10 14 13 9) //outlet block face, middle
(14 22 21 13) //top block face, inner
(22 6 5 21) //top block face outer
(9 13 21 17) //right block face inner
(17 21 5 1) //right block face outer
(18 22 14 10) // left block face inner
(2 6 22 18) // left block face outer
(10 9 17 18) //bottom block face, inner
(18 17 1 2) // bottom face, outer
);
}
walls
{
type wall;
faces
(
(0 3 2 1)
(0 1 5 4)
(3 7 6 2)
(4 5 6 7)
);
}
);

// ************************************************** *********************** //

DecomposeParDict
************************************************** *****************************************

/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 3.0.0 |
| \\ / A nd | Web: www.OpenFOAM.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
location "system";
object decomposeParDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

numberOfSubdomains 16;

method simple;

simpleCoeffs
{
n (4 2 2);
delta 0.001;
}

hierarchicalCoeffs
{
n (1 1 1);
delta 0.001;
order xyz;
}

manualCoeffs
{
dataFile "";
}

distributed no;

roots ( );


// ************************************************** *********************** //


Regards
Shafik
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