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Old   October 8, 2015, 10:56
Default isoSurface normal
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Andrea Ferrari
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Hi All,

i am facing some problems using sampleIsoSurface to extract the iso surface of alpha1 (interFoam) during the run. The case is 2D and i am simulating a simple drop relaxation. I correctly defined the surface which is triangulated and i extracted the centre and the normal of each triangle. There are two problems: first the normals are not pointing in the same direction (all inward, all outward with respect to the iso surface) but they seem to have random direction. Second i do not understand why, even if the case is 2D (x-y plane), there are some normals with non-zero z component.
Does sampleIsoSurface work for 2D?

If i do 3D, the problem on the random normal direction remains...

Any clue?

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Old   October 8, 2015, 17:46
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Try filling a bug report in the MANTIS OpenFOAM platform, maybe there is a bug in the code
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Old   October 9, 2015, 09:53
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Andrea Ferrari
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I am not sure it is really a bug or (more likely) i am simply doing something wrong. So here are the steps i used to create the surface.

1) i created a dictionary name "alpha05Dict" and put it in /constant

version 2.0;
format ascii;
class dictionary;
location "constant";
object sampleDict;
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

isoField alpha1;
isoValue 0.5;
interpolate true;
//zone ABC; // Optional: zone only
//exposedPatchName fixedWalls; // Optional: zone only
//regularise false; // Optional: do not simplify
Then in createField.H i read the dictionary with

 IOdictionary alpha05Dict
I created the surface by calling the appropiate function and then used the method update()

 sampledIsoSurface alpha05("alpha05",mesh,alpha05Dict);
tmp<vectorField>  alpha05point = alpha05.points();    //points on the surface
faceList surfaceFace = alpha05.faces();      //faces on the surface
Then to calculate normals and centers i loop over the faces

  pointField pp(alpha05point );

 vectorField areavec(surfaceFace.size(),vector(0,0,0));
 vectorField centre(surfaceFace.size(),vector(0,0,0));
 vectorField areavec1(surfaceFace.size(),vector(0,0,0));
 vectorField centre1(surfaceFace.size(),vector(0,0,0));

      const face& ll = surfaceFace[facei];  //list of  point label of facei
      const pointField& pll = ll.points(alpha05point);

        areavec[facei] = 0.5*(pp[ll[0]] ^ pp[ll[1]]) + 0.5*(pp[ll[1]] ^ pp[ll[2]]) + 0.5*(pp[ll[2]] ^  pp[ll[0]]);
        centre[facei] = (1.0/3.0) * (pp[ll[0]] + pp[ll[1]] + pp[ll[2]]);

          areavec1[facei] = ll.normal(pll);
          centre1[facei] = ll.centre(pll);

I calculated centers and vector area using standard formula for a triangle (centre, areavec) and using the in-bluid functions of the class face (centre1, areavec1). The should return the same values...
Then i pun some "Info" to print the calculated centers and normals.

Points3((0.028 0.0290354 0.0001) (0.028 0.0290354 3.53975e-06) (0.0280251 0.0290251 9.74915e-05)) //points on a particular face

areavec1(0 0 0)

areavec(-4.97389e-10 -1.20984e-09 0)

Centre1 (0 0 0)

Centre (0.0280084 0.029032 6.70104e-05)
This is just an example, but what i got is something like this for every face. .normal() and .centre() always return zero and i don't know why.
If i plot the vector area obtained with the explicit formula i have the problem mentioned in my previous post: the direction of the vectors seems more or less random (sometime inward, sometime outward) and there are vectors with non-zero z component (case is 2D). I noticed that in isoSurface.H is reported
"- does not do 2D correctly, creates non-flat iso surface.",
which probably explains why i get strange orientation with 2D. Despite this if I sum up the face area vector magnitude i get the total interfacial area with an error less than 0.002% for a fine mesh, so the triangulated isosurface seems to well represent the 0.5 contourn of the VOF function.
I simulated the same case 3D but i still have problem with the orientation of the vectors.

Any help will be really appreaciated.
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