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Problem while compiling modified simpleFoam solver

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Old   May 26, 2020, 20:01
Default Problem while compiling modified simpleFoam solver
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Mattia Fabrizio Ciarlatani
Join Date: May 2020
Posts: 7
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Hi everyone,

I'm writing here because I'm having trouble to compile a modified version of simpleFoam pointing to a new turbulenceClass.

Since I need to add new members to the original openfoam turbulenceModel class, I implemented a new turbulenceModel class in OpenFOAM named turbulenceModelDSDL.
To do this, I copied the entire folder OpenFOAM-v1906/src/TurbulenceModels/incompressible and OpenFOAM-v1906/src/TurbulenceModels/turbulenceModels to my personal directory $WM_PROJECT_USER_DIR/src/turbulenceModels. After doing this, I renamed in every file every instance of turbulenceModel turbulenceModelDSDL, renamed turbolenceModel.* themselves, added the new members, and modified the incompressible/Make/* and turbulenceModels/Make/* as

turbulenceModels/Make/files:

Code:
turbulenceModelDSDL.C

/* Wall Functions */
wallFunctions = derivedFvPatchFields/wallFunctions

nutWallFunctions = $(wallFunctions)/nutWallFunctions
$(nutWallFunctions)/DSDLnutstoWallFunction/DSDLnutstoWallFunctionFvPatchScalarField.C
$(nutWallFunctions)/DSDLnutcohWallFunction/DSDLnutcohWallFunctionFvPatchScalarField.C

epsilonWallFunctions = $(wallFunctions)/epsilonWallFunctions
$(epsilonWallFunctions)/DSDLepsilonWallFunction/DSDLepsilonWallFunctionFvPatchScalarField.C
$(epsilonWallFunctions)/DSDLmyEpsilonRoughWallFunction/DSDLmyEpsilonRoughWallFunctionFvPatchScalarField.C

LIB = $(FOAM_USER_LIBBIN)/libDSDLTurbulenceModels
turbulenceModels/Make/options:

Code:
EXE_INC = \
    -I$(LIB_SRC)/finiteVolume/lnInclude \
    -I$(LIB_SRC)/meshTools/lnInclude

LIB_LIBS = \
    -lfiniteVolume \
    -lmeshTools
incompressible/Make/files:

Code:
incompressibleTurbulenceModel.C
turbulentTransportModels/turbulentTransportModels.C

LIB = $(FOAM_USER_LIBBIN)/libDSDLincompressibleTurbulenceModels
incompressible/Make/options:

Code:
EXE_INC = \
    -I../turbulenceModels/lnInclude \
    -I$(LIB_SRC)/finiteVolume/lnInclude \
    -I$(LIB_SRC)/meshTools/lnInclude \
    -I$(LIB_SRC)/transportModels
LIB_LIBS = \
    -L$(FOAM_USER_LIBBIN) \
    -lfiniteVolume \
    -lmeshTools \
    -lincompressibleTransportModels
-L$(FOAM_USER_LIBBIN) is needed in order to include the class turbulenceModelDSDL which is defined in $(FOAM_USER_LIBBIN)/libDSDLTurbulenceModels.

I also changed the name of the library turbulentTransportModel.H to turbulentTransportModelDSDL.H.
Once I did this, I compiled turbulenceModelDSDL.C, a number of wall functions belonging to this new class, incompressibleTurbulenceModel.C, and turbulenceTransportModelsDSDL.H, which contained a new turbulence model called RNGkEpsilonDSDL.
Up to this point, everything worked just fine: the compilation was successfull and OpenFOAM is able to see the new turbulence model, RNGkEpsilonDSDL, and the new wall functions.

Since I now need to use the RNGkEpsilonDSDL model with simpleFoam, and this model belongs to the class turbulenceModelDSDL, I need to modify the simpleFoam solver to correctly generate the pointer to the new turbulenceModelDSDL class.
To do this, I copied the simpleFoam folder, renamed it to DSDLsimpleFoam, included the new header turbulenceTransportModelDSDL.H in DSDLsimpleFoam.C

Code:
\*---------------------------------------------------------------------------*/

#include "fvCFD.H"
#include "singlePhaseTransportModel.H"
#include "turbulentTransportModelDSDL.H"
#include "simpleControl.H"
#include "fvOptions.H"

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
I also modified the call to the turbulence model to
Code:
autoPtr<incompressible::turbulenceModelDSDL> turbulence
(
    incompressible::turbulenceModelDSDL::New(U, phi, laminarTransport)
);
Once i did this I modified DSDLsimpleFoam/Make/* to read the libraries in which turbulenceTransportModelsDSDL.H and turbulenceModelDSDL are defined

DSDLsimpleFoam/Make/files:

Code:
DSDLsimpleFoam.C

EXE = $(FOAM_USER_APPBIN)/DSDLsimpleFoam
DSDLsimpleFoam/Make/options:

Code:
EXE_INC = \
    -I$(LIB_SRC)/finiteVolume/lnInclude \
    -I$(LIB_SRC)/meshTools/lnInclude \
    -I$(LIB_SRC)/sampling/lnInclude \
    -I$$WM_PROJECT_USER_DIR/src/TurbulenceModels/incompressible/lnInclude \
    -I$$WM_PROJECT_USER_DIR/src/TurbulenceModels/turbulenceModels/lnInclude \
    -I$(LIB_SRC)/transportModels \
    -I$(LIB_SRC)/transportModels/incompressible/singlePhaseTransportModel

EXE_LIBS = \
    -lfiniteVolume \
    -lfvOptions \
    -lmeshTools \
    -lsampling \
    -L$(FOAM_USER_LIBBIN)\
    -lincompressibleTransportModels \
    -latmosphericModels
-L$(FOAM_USER_LIBBIN) replaced () and includes the class turbulenceModelDSDL and which is defined in $(FOAM_USER_LIBBIN)/libDSDLincompressibleTurbulenceModels.

When I try to compile DSDLsimpleFoam I get the following error:

Code:
Making dependency list for source file DSDLsimpleFoam.C
g++ -std=c++11 -m64 -DOPENFOAM=1906 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -Wno-attributes -Wno-unknown-pragmas -O3  -DNoRepository -ftemplate-depth-100 -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/finiteVolume/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/meshTools/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/sampling/lnInclude -I$WM_PROJECT_USER_DIR/src/TurbulenceModels/incompressible/lnInclude -I$WM_PROJECT_USER_DIR/src/TurbulenceModels/turbulenceModels/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/transportModels -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/transportModels/incompressible/singlePhaseTransportModel -IlnInclude -I. -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/OpenFOAM/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/OSspecific/POSIX/lnInclude   -fPIC -c DSDLsimpleFoam.C -o Make/linux64GccDPInt32Opt/DSDLsimpleFoam.o
g++ -std=c++11 -m64 -DOPENFOAM=1906 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -Wno-attributes -Wno-unknown-pragmas -O3  -DNoRepository -ftemplate-depth-100 -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/finiteVolume/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/meshTools/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/sampling/lnInclude -I$WM_PROJECT_USER_DIR/src/TurbulenceModels/incompressible/lnInclude -I$WM_PROJECT_USER_DIR/src/TurbulenceModels/turbulenceModels/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/transportModels -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/transportModels/incompressible/singlePhaseTransportModel -IlnInclude -I. -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/OpenFOAM/lnInclude -I/home/mattia/OpenFOAM/OpenFOAM-v1906/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/DSDLsimpleFoam.o -L/home/mattia/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib \
    -lfiniteVolume -lfvOptions -lmeshTools -lsampling -L/home/mattia/OpenFOAM/mattia-v1906/platforms/linux64GccDPInt32Opt/lib -lincompressibleTransportModels -latmosphericModels  -lOpenFOAM -ldl  \
     -lm -o /home/mattia/OpenFOAM/mattia-v1906/platforms/linux64GccDPInt32Opt/bin/DSDLsimpleFoam
Make/linux64GccDPInt32Opt/DSDLsimpleFoam.o: In function `main':
DSDLsimpleFoam.C:(.text.startup+0x1733): undefined reference to `Foam::turbulenceModelDSDL::propertiesName'
DSDLsimpleFoam.C:(.text.startup+0x403a): undefined reference to `Foam::turbulenceModelDSDL::propertiesName'
collect2: error: ld returned 1 exit status
/home/mattia/OpenFOAM/OpenFOAM-v1906/wmake/makefiles/general:140: recipe for target '/home/mattia/OpenFOAM/mattia-v1906/platforms/linux64GccDPInt32Opt/bin/DSDLsimpleFoam' failed
make: *** [/home/mattia/OpenFOAM/mattia-v1906/platforms/linux64GccDPInt32Opt/bin/DSDLsimpleFoam] Error 1
To try and ovrecome the problem I tried to repeat the process from the beginning and I still get the same error.

I included here DSDLsimpleFoam in case you want to take a look at it

Any help will be appreciated.

Thanks for your time,
Mattia

P.S.: is the first time i write a post here so please tell me if there are mistakes on this thread


UPDATE:



Hey guys, I have an update:


I was able to compile the solver by modifying the pointer definition to


Code:
autoPtr<incompressible::turbulenceModelDSDL> turbulence
(
    incompressible::turbulenceModelDSDL::New(U, phi, laminarTransport, "someRandomWord")
);

which means that the undefined reference was just asking to input some string as turbulenceProperties.

My question now is: why do I need to input something there while the normal simpleFoam does not require anything? In other words: what would happen if I defined the pointer in simpleFoam as


Code:
autoPtr<incompressible::turbulenceModel> turbulence
(
    incompressible::turbulenceModel::New(U, phi, laminarTransport, "someRandomWord")
);
?
Attached Files
File Type: gz DSDLsimpleFoam.tar.gz (6.1 KB, 5 views)

Last edited by mattiafc; May 27, 2020 at 13:20.
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compilation error, inheritance, linking, simplefoam, turbulencemodels

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