| zhoubiao1088 |
December 16, 2016 07:38 |
Segmentation fault (core dumped)
3 Attachment(s)
who can help me think the error source ? I have spent several days on it. Please help. Thanks in advance!
Best regards
Zhou
HTML Code:
[#48#zhou@zhou-All-Series ~/OpenFOAM/zhou-2.2.x/run/f/20161215/20161209]$checkMesh -allTopology -allGeometry
/*---------------------------------------------------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 2.2.x |
| \\ / A nd | Web: www.OpenFOAM.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
Build : 2.2.x-1f35a0ff2a58
Exec : checkMesh -allTopology -allGeometry
Date : Dec 16 2016
Time : 21:40:24
Host : "zhou-All-Series"
PID : 18490
Case : /home/zhou/OpenFOAM/zhou-2.2.x/run/f/20161215/20161209
nProcs : 1
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Disallowing user-supplied system call operations
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time
--> FOAM Warning :
From function dlOpen(const fileName&, const bool)
in file POSIX.C at line 1179
dlopen error : /home/zhou/OpenFOAM/zhou-2.2.x/platforms/linux64GccDPOpt/lib/libfvPatchFieldsPyrolysis.so: undefined symbol: _ZTIN4Foam11basicThermoE
--> FOAM Warning :
From function dlLibraryTable::open(const fileName&, const bool)
in file db/dynamicLibrary/dlLibraryTable/dlLibraryTable.C at line 99
could not load "libfvPatchFieldsPyrolysis.so"
Create polyMesh for time = 0
Enabling all (cell, face, edge, point) topology checks.
Enabling all geometry checks.
Time = 0
Mesh stats
points: 544563
faces: 1599538
internal faces: 1549262
cells: 524800
faces per cell: 6
boundary patches: 10
point zones: 0
face zones: 7
cell zones: 0
Overall number of cells of each type:
hexahedra: 524800
prisms: 0
wedges: 0
pyramids: 0
tet wedges: 0
tetrahedra: 0
polyhedra: 0
Checking topology...
Boundary definition OK.
Cell to face addressing OK.
Point usage OK.
Upper triangular ordering OK.
Face vertices OK.
Topological cell zip-up check OK.
Number of identical duplicate faces (baffle faces): 5618
Face-face connectivity OK.
<<Writing 11236 faces with non-standard edge connectivity to set edgeFaces
Number of regions: 1 (OK).
Checking patch topology for multiply connected surfaces...
Patch Faces Points Surface topology Bounding box
wall 6560 6723 ok (non-closed singly connected) (-2 -2 0) (-2 2 4.1)
side 19680 20003 ok (non-closed singly connected) (-2 -2 0) (2 2 4.1)
outlet 6400 6561 ok (non-closed singly connected) (-2 -2 4.1) (2 2 4.1)
ground 5616 5832 ok (non-closed singly connected) (-2 -2 0) (2 2 0)
burner 144 169 ok (non-closed singly connected) (-1.9 -0.3 0) (-1.3 0.3 0)
floor 640 709 ok (non-closed singly connected) (-1.9 -0.7 0) (-0.5 0.7 0)
baffle1DWall_master 2990 3107 ok (non-closed singly connected) (-1.9 -0.7 0) (-0.5 0.7 1.4)
baffle1DWall_slave 2990 3107 ok (non-closed singly connected) (-1.9 -0.7 0) (-0.5 0.7 1.4)
baffle1DWall_slave1 2628 2782 ok (non-closed singly connected) (-0.5 -0.9 0) (-0.5 0.9 4.1)
region0_to_panelRegion_panel2628 2782 ok (non-closed singly connected) (-0.5 -0.9 0) (-0.5 0.9 4.1)
Checking geometry...
Overall domain bounding box (-2 -2 0) (2 2 4.1)
Mesh (non-empty, non-wedge) directions (1 1 1)
Mesh (non-empty) directions (1 1 1)
Boundary openness (2.91283e-17 -8.9876e-17 4.44964e-17) OK.
Max cell openness = 1.73472e-16 OK.
Max aspect ratio = 1 OK.
Minimum face area = 0.0025. Maximum face area = 0.0025. Face area magnitudes OK.
Min volume = 0.000125. Max volume = 0.000125. Total volume = 65.6. Cell volumes OK.
Mesh non-orthogonality Max: 0 average: 0
Non-orthogonality check OK.
Face pyramids OK.
Max skewness = 2.00012e-11 OK.
Coupled point location match (average 0) OK.
Face tets OK.
Min/max edge length = 0.05 0.05 OK.
All angles in faces OK.
Face flatness (1 = flat, 0 = butterfly) : average = 1 min = 1
All face flatness OK.
Cell determinant (wellposedness) : minimum: 1 average: 7.62223
Cell determinant check OK.
Concave cell check OK.
Mesh OK.
End
HTML Code:
[#21#zhou@zhou-All-Series ~/OpenFOAM/zhou-2.2.x/run/f/20161215/20161209]$fireFoam
/*---------------------------------------------------------------------------*\
| ========= | |
| \\ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \\ / O peration | Version: 2.2.x |
| \\ / A nd | Web: www.OpenFOAM.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
Build : 2.2.x-1f35a0ff2a58
Exec : fireFoam
Date : Dec 16 2016
Time : 21:19:58
Host : "zhou-All-Series"
PID : 17763
Case : /home/zhou/OpenFOAM/zhou-2.2.x/run/f/20161215/20161209
nProcs : 1
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Disallowing user-supplied system call operations
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
FireFOAM Build Version: 9f8ab38ff7dce6108bc5b4c155b18de7c8a3c4ba
FireFOAM Build Time Stamp: Fri Dec 16 20:33:03 JST 2016
****************************************************
Create time
Create mesh for time = 0
Reading g
Creating combustion model
Selecting combustion model eddyDissipationModel<psiThermoCombustion,gasHThermoPhysics>
Selecting thermodynamics package
{
type hePsiThermo;
mixture singleStepReactingMixture;
transport sutherland;
thermo janaf;
energy sensibleEnthalpy;
equationOfState perfectGas;
specie specie;
}
Selecting chemistryReader foamChemistryReader
--> FOAM Warning :
From function entry::getKeyword(keyType&, Istream&)
in file db/dictionary/entry/entryIO.C at line 80
Reading /home/zhou/OpenFOAM/zhou-2.2.x/run/f/20161215/20161209/0/N2
found on line 102 the punctuation token '*'
expected either } or EOF
--> FOAM Warning :
From function entry::getKeyword(keyType&, Istream&)
in file db/dictionary/entry/entryIO.C at line 80
Reading /home/zhou/OpenFOAM/zhou-2.2.x/run/f/20161215/20161209/0/N2
found on line 102 the punctuation token '/'
expected either } or EOF
Fuel heat of combustion :4.63572e+07
stoichiometric air-fuel ratio :15.5715
stoichiometric oxygen-fuel ratio :3.62829
Maximum products mass concentrations:
H2O: 0.0986136
CO2: 0.180679
N2: 0.720707
Combustion mode: explicit
Reading thermophysical properties
Creating component thermo properties:
multi-component carrier - 5 species
no liquid components
no solid components
Creating field rho
Reading field p_rgh
Reading field U
Reading/calculating face flux field phi
Creating turbulence model
Selecting turbulence model type LESModel
Selecting LES turbulence model oneEqEddy
Selecting LES delta type cubeRootVol
oneEqEddyCoeffs
{
Prt 1;
ce 1.048;
ck 0.094;
}
stoichiometric mixture fraction is = 0.0603444
Creating field DpDt
Calculating field g.h
Creating pyrolysis model collection
Selecting pyrolysisModel reactingOneDim21
Selecting region model functions
none
Selecting chemistry type
{
chemistrySolver ode;
chemistryThermo pyrolysisChemistryModel;
}
chemistryTypeName ode<pyrolysisChemistryModel<basicSolidChemistryModel,constIso<hConst<rhoConst<specie>>,sensibleEnthalpy>,sutherland<janaf<perfectGas<specie>>,sensibleEnthalpy>>>
Selecting thermodynamics package
{
type heSolidThermo;
mixture reactingMixture;
transport constIso;
thermo hConst;
energy sensibleEnthalpy;
equationOfState rhoConst;
specie specie;
}
Selecting chemistryReader foamChemistryReader
pyrolysisChemistryModel:
Number of solids = 2
Number of gases = 1
"v^4.86 = char + gas";
Selecting ODE solver SIBS
Selecting radiationModel opaqueSolid
Selecting absorptionEmissionModel greyMeanSolidAbsorptionEmission
Selecting scatterModel none
Selecting radiationModel fvDOM
Selecting absorptionEmissionModel constRadFractionEmission
Selecting scatterModel constantScatter
fvDOM : Allocated 16 rays with average orientation:
I0 : omega : 0.785398
I1 : omega : 0.785398
I2 : omega : 0.785398
I3 : omega : 0.785398
I4 : omega : 0.785398
I5 : omega : 0.785398
I6 : omega : 0.785398
I7 : omega : 0.785398
I8 : omega : 0.785398
I9 : omega : 0.785398
I10 : omega : 0.785398
I11 : omega : 0.785398
I12 : omega : 0.785398
I13 : omega : 0.785398
I14 : omega : 0.785398
I15 : omega : 0.785398
Constructing reacting cloud
Constructing particle injection models
Selecting injection model none
Constructing surface film model
Selecting surfaceFilmModel none
Selecting region model functions
none
Courant Number mean: 0 max: 0
Starting time loop
cellSource HRR:all(c0):
total cells = 524800
total volume = 65.6
faceSource patchBurner:
total faces = 144
total area = 0.36
faceSource patchPanel:
total faces = 2628
total area = 6.57
faceSource patchOutlet:
total faces = 6400
total area = 16
faceSource patchPanelSolidRegion:
total faces = 2628
total area = 6.57
faceSource patchPanelQr:
total faces = 2628
total area = 6.57
faceSource patchWallQr:
total faces = 6560
total area = 16.4
faceSource patchSideQr:
total faces = 19680
total area = 49.2
faceSource patchBurnerQr:
total faces = 144
total area = 0.36
faceSource patchOutletQr:
total faces = 6400
total area = 16
faceSource patchGroundQr:
total faces = 5616
total area = 14.04
faceSource patchPanelQin:
total faces = 2628
total area = 6.57
faceSource patchPanelConvectiveHeatFlux:
total faces = 2628
total area = 6.57
surfaces patchSamplingGas: Reading surface description:
pyrolysisPatch
Courant Number mean: 0 max: 0
deltaT = 0.00952381
Time = 0.00952381
diagonal: Solving for rho, Initial residual = 0, Final residual = 0, No Iterations 0
DILUPBiCG: Solving for Ux, Initial residual = 1, Final residual = 2.91856e-08, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 1, Final residual = 3.02462e-08, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 1, Final residual = 3.28988e-08, No Iterations 1
DILUPBiCG: Solving for O2, Initial residual = 0.999447, Final residual = 1.89125e-15, No Iterations 2
DILUPBiCG: Solving for H2O, Initial residual = 0, Final residual = 0, No Iterations 0
DILUPBiCG: Solving for C3H8, Initial residual = 1, Final residual = 2.17871e-15, No Iterations 2
DILUPBiCG: Solving for CO2, Initial residual = 0, Final residual = 0, No Iterations 0
O2 min/ave/max = 0.23301 0.23301 0.23301
H2O min/ave/max = 0 0 0
C3H8 min/ave/max = -6.9622e-127 3.3546e-16 6.3517e-14
CO2 min/ave/max = 0 0 0
N2 min/ave/max = 0.76699 0.76699 0.76699
#0 Foam::error::printStack(Foam::Ostream&) at ??:?
#1 Foam::sigSegv::sigHandler(int) at ??:?
#2 in "/lib/x86_64-linux-gnu/libc.so.6"
#3 Foam::mapDistribute::mapDistribute(Foam::List<int> const&, Foam::List<int> const&) at ??:?
#4 Foam::mappedPatchBase::calcMapping() const at ??:?
#5 Foam::compressible::thermalBaffle1DFvPatchScalarField<Foam::constIsoSolidTransport<Foam::species::thermo<Foam::hConstThermo<Foam::rhoConst<Foam::specie> >, Foam::sensibleEnthalpy> > >::updateCoeffs() at ??:?
#6 Foam::mixedFvPatchField<double>::evaluate(Foam::UPstream::commsTypes) at ??:?
#7 Foam::mixedEnergyFvPatchScalarField::updateCoeffs() at ??:?
#8 Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh>::GeometricBoundaryField::updateCoeffs() at ??:?
#9 Foam::fvMatrix<double>::fvMatrix(Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh> const&, Foam::dimensionSet const&) at ??:?
#10 Foam::tmp<Foam::fvMatrix<double> > Foam::fvm::Sp<double>(Foam::DimensionedField<double, Foam::volMesh> const&, Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
#11 Foam::tmp<Foam::fvMatrix<double> > Foam::fvm::Sp<double>(Foam::tmp<Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh> > const&, Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
#12 Foam::radiation::radiationModel::Sh(Foam::fluidThermo&) const at ??:?
#13
at ??:?
#14 __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6"
#15
at ??:?
Segmentation fault (core dumped)
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