foamJob 'pimpleFoam' not found (OpenFOAM-v1812)

SGWANG · August 13, 2019, 08:23

Hi everybody.

I have a problem submitting a mpirun mission to the cluster. I have installed openFoam-v1812 in centOS. Now I am trying to do a mpi running on the cluster.

I used the command in mpi.sh file

Code:

mpirun -v -machinefile $TMPDIR/machines -np 8 /home/cfd06/OpenFOAM/OpenFOAM-v1812/bin/foamJob pimpleFoam -parallel > log.pimpleFoam

And got the error 'pimpleFoam' not found.

But if I used the command directly on the shell

Code:

mpirun -np 8 pimpleFoam -parallel

It would work.

Update:

Well, I solved this error with a new one came.

/home/cfd06/OpenFOAM/OpenFOAM-v1812/platforms/linux64GccDPInt64Opt/bin/pimpleFoam: error while loading shared libraries: libmpi.so.1: cannot open shared object file: No such file or directory

Does any one have an idea ? I have been fighting for this error for a long time...

Thank you!

sufjanst · August 14, 2019, 03:40

When I start openFOAM on our cluster, I have to load the GCC-Compiler and the OpenMPI module before I load OpenFOAM.

Maybe you have to do that as well.

Second, depending on you PBS system you run-command can vary from the tutorials. On our cluster the run-command in the script is:

mpirun pimpleFoam -parallel > logfile

The machine specifications are taken from the PBS script automatically.

August 13, 2019, 08:23	foamJob 'pimpleFoam' not found (OpenFOAM-v1812)	#1
SGWANG New Member Shuguang Wang Join Date: Feb 2018 Posts: 13 Rep Power: 8	Hi everybody. I have a problem submitting a mpirun mission to the cluster. I have installed openFoam-v1812 in centOS. Now I am trying to do a mpi running on the cluster. I used the command in mpi.sh file Code: mpirun -v -machinefile $TMPDIR/machines -np 8 /home/cfd06/OpenFOAM/OpenFOAM-v1812/bin/foamJob pimpleFoam -parallel > log.pimpleFoam And got the error 'pimpleFoam' not found. But if I used the command directly on the shell Code: mpirun -np 8 pimpleFoam -parallel It would work. Update: Well, I solved this error with a new one came. /home/cfd06/OpenFOAM/OpenFOAM-v1812/platforms/linux64GccDPInt64Opt/bin/pimpleFoam: error while loading shared libraries: libmpi.so.1: cannot open shared object file: No such file or directory Does any one have an idea ? I have been fighting for this error for a long time... Thank you!

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August 14, 2019, 03:40		#2
sufjanst Member Join Date: Mar 2016 Posts: 73 Rep Power: 10	When I start openFOAM on our cluster, I have to load the GCC-Compiler and the OpenMPI module before I load OpenFOAM. Maybe you have to do that as well. Second, depending on you PBS system you run-command can vary from the tutorials. On our cluster the run-command in the script is: mpirun pimpleFoam -parallel > logfile The machine specifications are taken from the PBS script automatically.