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-   -   A error about the parallel after the PC reboot (https://www.cfd-online.com/Forums/openfoam-solving/254938-error-about-parallel-after-pc-reboot.html)

YupengDuan March 9, 2024 09:21

A error about the parallel after the PC reboot
 
Hi
today, My computer crashed while calculating, then I restarted it, but after restarting it can't parallelize the calculations, I tested it using the example stokesI under the tut folder, the log file is as follows:
Code:

[huiwei-Super-Server:13717] *** Process received signal ***
[huiwei-Super-Server:13717] Signal: Segmentation fault (11)
[huiwei-Super-Server:13717] Signal code:  (128)
[huiwei-Super-Server:13717] Failing at address: (nil)
[huiwei-Super-Server:13718] *** Process received signal ***
[huiwei-Super-Server:13718] Signal: Segmentation fault (11)
[huiwei-Super-Server:13718] Signal code:  (128)
[huiwei-Super-Server:13718] Failing at address: (nil)
[huiwei-Super-Server:13718] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x12980)[0x7f800f190980]
[huiwei-Super-Server:13718] [ 1] /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi/mca_pmix_pmix112.so(PMIx_Init+0x13f)[0x7f80069e7d3f]
[huiwei-Super-Server:13718] [ 2] /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi/mca_pmix_pmix112.so(pmix1_client_init+0x75)[0x7f80069bbcb5]
[huiwei-Super-Server:13718] [ 3] /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi/mca_ess_singleton.so(+0x2474)[0x7f8007433474]
[huiwei-Super-Server:13718] [ 4] /usr/lib/x86_64-linux-gnu/libopen-rte.so.20(orte_init+0x22e)[0x7f8008fe91de]
[huiwei-Super-Server:13718] [ 5] /usr/lib/x86_64-linux-gnu/libmpi.so.20(ompi_mpi_init+0x30e)[0x7f800a56027e]
[huiwei-Super-Server:13718] [ 6] /usr/lib/x86_64-linux-gnu/libmpi.so.20(PMPI_Init_thread+0x45)[0x7f800a581405]
[huiwei-Super-Server:13718] [ 7] /usr/lib/openfoam/openfoam2306/platforms/linux64GccDPInt32Opt/lib/sys-openmpi/libPstream.so(_ZN4Foam8UPstream4initERiRPPcb+0x98)[0x7f800eb6c478]
[huiwei-Super-Server:13718] [ 8] [huiwei-Super-Server:13717] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x12980)[0x7f7752fee980]
[huiwei-Super-Server:13717] [ 1] /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi/mca_pmix_pmix112.so(PMIx_Init+0x13f)[0x7f774a845d3f]
[huiwei-Super-Server:13717] [ 2] /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi/mca_pmix_pmix112.so(pmix1_client_init+0x75)[0x7f774a819cb5]
[huiwei-Super-Server:13717] [ 3] /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi/mca_ess_singleton.so(+0x2474)[0x7f774b291474]
[huiwei-Super-Server:13717] [ 4] /usr/lib/x86_64-linux-gnu/libopen-rte.so.20(orte_init+0x22e)[0x7f774ce471de]
[huiwei-Super-Server:13717] [ 5] /usr/lib/x86_64-linux-gnu/libmpi.so.20(ompi_mpi_init+0x30e)[0x7f774e3be27e]
[huiwei-Super-Server:13717] [ 6] /usr/lib/x86_64-linux-gnu/libmpi.so.20(PMPI_Init_thread+0x45)[0x7f774e3df405]
[huiwei-Super-Server:13717] [ 7] /usr/lib/openfoam/openfoam2306/platforms/linux64GccDPInt32Opt/lib/sys-openmpi/libPstream.so(_ZN4Foam8UPstream4initERiRPPcb+0x98)[0x7f77529ca478]
[huiwei-Super-Server:13717] [ 8] /usr/lib/openfoam/openfoam2306/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam7argListC1ERiRPPcbbb+0x310)[0x7f80102e45e0]
[huiwei-Super-Server:13718] [ 9] interFoam(+0x46a8c)[0x562be93c6a8c]
[huiwei-Super-Server:13718] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7)[0x7f800edaec87]
[huiwei-Super-Server:13718] [11] interFoam(+0x54f4a/usr/lib/openfoam/openfoam2306/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam7argListC1ERiRPPcbbb+0x310)[0x7f77541425e0]
[huiwei-Super-Server:13717] [ 9] interFoam(+0x46a8c)[0x5650b4393a8c]
[huiwei-Super-Server:13717] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7)[0x7f7752c0cc87]
[huiwei-Super-Server:13717] [11] interFoam(+0x54f4a)[0x5650b43a1f4a]
[huiwei-Super-Server:13717] *** End of error message ***
)[0x562be93d4f4a]
[huiwei-Super-Server:13718] *** End of error message ***
--------------------------------------------------------------------------
prterun noticed that process rank 0 with PID 0 on node huiwei-Super-Server exited on
signal 11 (Segmentation fault).
--------------------------------------------------------------------------

It should be noted that before my computer died, I used the quick reconfiguration method on the forum but may have set too many cores.
PHP Code:

https://www.cfd-online.com/Forums/openfoam-post-processing/64652-bash-script-pseudo-parallel-usage-reconstructpar.html 



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