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October 12, 2013, 17:31 |
parallel processing Error
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#1 |
Member
Arjang Behnoud
Join Date: Oct 2012
Posts: 61
Rep Power: 13 |
Hi Dear All
I can not run my case in parallel while I've run the case in serial with no problem. the geometry is pipe with length and diameter equal to 4m and 0.025m in order. the Error : Code:
[1] #0 Foam::error::printStack(Foam::Ostream&)[3] #0 Foam::error::printStack(Foam::Ostream&)[2] #0 [4] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)[0] #0 [5] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [4] #1 Foam::sigFpe::sigHandler(int) in "/opt/openfoam211/p in "/opt/openfoam211/platforms/llatforms/linux64GccDPOptinux64GccDPOpt/lib/libOpenFOAM.so" [1] #1/lib/libOpenFOAM.so" [3] #1 Foam::sigFpe::sigHandler(int)Foam::sigFpe::sigHandler(int) in in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so""/opt/openfoam211/platforms/l [0] #1 inux64GccDPOpt/lib/libOpenFOAM.so" Foam::sigFpe::sigHandler(int)[5] #1 Foam::sigFpe::sigHandler(int) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [2] #1 Foam::sigFpe::sigHandler(int) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [3] #2 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [1] #2 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [5] #2 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [4] #2 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [0] #2 in "/lib/x86_64-linux-gnu/libc.so.6" in "/opt/openf [3] #3 Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) constoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [2] #2 in "/lib/x86_64-linux-gnu/libc.so.6" [1] #3 Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib/x86_64-linux-gnu/libc.so.6" [5] #3 Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib/x86_64-linux-gnu/libc.so.6" [4] #3 Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib/x86_64-linux-gnu/libc.so.6" [2] #3 Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/lib/x86_64-linux-gnu/libc.so.6" [0] #3 Foam::PBiCG::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [3] #4 Foam::fvMatrix<double>::solve(Foam::dictionary const&) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [5] #4 Foam::fvMatrix<double>::solve(Foam::dictionary const&) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" in "[1] #4 Foam::fvMatrix<double>::solve(Foam::dictionary const&)/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [4] #4 Foam::fvMatrix<double>::solve(Foam::dictionary const&) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [2] #4 Foam::fvMatrix<double>::solve(Foam::dictionary const&) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so" [0] #4 Foam::fvMatrix<double>::solve(Foam::dictionary const&) in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so" [1] #5 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so" [3] #5 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so" [5] #5 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so" [2] #5 in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so" [4] #5 Foam::fvMatrix<double>::solve()Foam::fvMatrix<double>::solve()Foam::fvMatrix<double>::solve()Foam::fvMatrix<double>::solve() in "/opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so" [0] #5 Foam::fvMatrix<double>::solve() in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [1] #6 in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [4] #6 Foam::fvMatrix<double>::solve() in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [3] #6 in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [5] #6 in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [2] #6 in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [0] #6 [5] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [5] #7 __libc_start_main[1] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [1] #7 __libc_start_main [3] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/li[4] in "/home/amir/Opnux64GccDPOpt/bin/nanoHeatSimpleFoam" [3] #7 __libc_start_mainenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [4] #7 __libc_start_main[2] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [2] #7 __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6" [5] #8 in "/lib/x86_64-linux-gnu/libc.so.6" [4] #8 [0] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [0] #7 __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6" [1] #8 in "/lib/x86_64-linux-gnu/libc.so.6" [2] #8 in "/lib/x86_64-linux-gnu/libc.so.6" [3] #8 in "/lib/x86_64-linux-gnu/libc.so.6" [0] #8 [5] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [amir-VPCF22CFX:14344] *** Process received signal *** [amir-VPCF22CFX:14344] Signal: Floating point exception (8) [amir-VPCF22CFX:14344] Signal code: (-6) [amir-VPCF22CFX:14344] Failing at address: 0x3e800003808 [amir-VPCF22CFX:14344] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x364a0) [0x7fd753b934a0] [amir-VPCF22CFX:14344] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x35) [0x7fd753b93425] [amir-VPCF22CFX:14344] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x364a0) [0x7fd753b934a0] [amir-VPCF22CFX:14344] [ 3] /opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so(_ZNK4Foam5PBiCG5solveERNS_5FieldIdEERKS2_h+0xd95) [0x7fd754bc5e55] [amir-VPCF22CFX:14344] [ 4] /opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so(_ZN4Foam8fvMatrixIdE5solveERKNS_10dictionaryE+0x137) [0x7fd755c59307] [amir-VPCF22CFX:14344] [ 5] nanoHeatSimpleFoam(_ZN4Foam8fvMatrixIdE5solveEv+0xdb) [0x428d1b] [amir-VPCF22CFX:14344] [ 6] nanoHeatSimpleFoam() [0x419f7b] [amir-VPCF22CFX:14344] [ 7] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed) [0x7fd753b7e76d] [amir-VPCF22CFX:14344] [ 8] nanoHeatSimpleFoam() [0x41c73d] [amir-VPCF22CFX:14344] *** End of error message *** [3] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [amir-VPCF22CFX:14342] *** Process received signal *** [amir-VPCF22CFX:14342] Signal: Floating point exception (8) [amir-VPCF22CFX:14342] Signal code: (-6) [amir-VPCF22CFX:14342] Failing at address: 0x3e800003806 [2] in "/home/amir/OpenFOAM/amir-2.1.1/platforms/linux64GccDPOpt/bin/nanoHeatSimpleFoam" [amir-VPCF22CFX:14342] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x364a0) [0x7fab381b44a0] [amir-VPCF22CFX:14342] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x35) [0x7fab381b4425] [amir-VPCF22CFX:14342] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x364a0) [0x7fab381b44a0] [amir-VPCF22CFX:14342] [ 3] /opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so(_ZNK4Foam5PBiCG5solveERNS_5FieldIdEERKS2_h+0xd95) [0x7fab391e6e55] [amir-VPCF22CFX:14342] [ 4] /opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so(_ZN4Foam8fvMatrixIdE5solveERKNS_10dictionaryE+0x137) [0x7fab3a27a307] [amir-VPCF22CFX:14342] [ 5] nanoHeatSimpleFoam(_ZN4Foam8fvMatrixIdE5solveEv+0xdb) [0x428d1b] [amir-VPCF22CFX:14342] [ 6] nanoHeatSimpleFoam() [0x419f7b] [amir-VPCF22CFX:14342] [ 7] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed) [0x7fab3819f76d] [amir-VPCF22CFX:14342] [ 8] nanoHeatSimpleFoam() [0x41c73d] [amir-VPCF22CFX:14342] *** End of error message *** [amir-VPCF22CFX:14341] *** Process received signal *** [amir-VPCF22CFX:14341] Signal: Floating point exception (8) [amir-VPCF22CFX:14341] Signal code: (-6) [amir-VPCF22CFX:14341] Failing at address: 0x3e800003805 [amir-VPCF22CFX:14341] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x364a0) [0x7f4e0d4914a0] [amir-VPCF22CFX:14341] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x35) [0x7f4e0d491425] [amir-VPCF22CFX:14341] [ 2] /lib/x86_64-linux-gnu/libc.so.6(+0x364a0) [0x7f4e0d4914a0] [amir-VPCF22CFX:14341] [ 3] /opt/openfoam211/platforms/linux64GccDPOpt/lib/libOpenFOAM.so(_ZNK4Foam5PBiCG5solveERNS_5FieldIdEERKS2_h+0xd95) [0x7f4e0e4c3e55] [amir-VPCF22CFX:14341] [ 4] /opt/openfoam211/platforms/linux64GccDPOpt/lib/libfiniteVolume.so(_ZN4Foam8fvMatrixIdE5solveERKNS_10dictionaryE+0x137) [0x7f4e0f557307] [amir-VPCF22CFX:14341] [ 5] nanoHeatSimpleFoam(_ZN4Foam8fvMatrixIdE5solveEv+0xdb) [0x428d1b] [amir-VPCF22CFX:14341] [ 6] nanoHeatSimpleFoam() [0x419f7b] [amir-VPCF22CFX:14341] [ 7] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed) [0x7f4e0d47c76d] [amir-VPCF22CFX:14341] [ 8] nanoHeatSimpleFoam() [0x41c73d] [amir-VPCF22CFX:14341] *** End of error message *** -------------------------------------------------------------------------- mpirun noticed that process rank 3 with PID 14342 on node amir-VPCF22CFX exited on signal 8 (Floating point exception). -------------------------------------------------------------------------- 2 total processes killed (some possibly by mpirun during cleanup) (110 10 10) your help is appreciated. Thanks Arjang |
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October 13, 2013, 03:18 |
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#3 |
Member
Arjang Behnoud
Join Date: Oct 2012
Posts: 61
Rep Power: 13 |
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October 15, 2013, 13:18 |
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#4 |
Member
Arjang Behnoud
Join Date: Oct 2012
Posts: 61
Rep Power: 13 |
nobody can help !!!
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October 15, 2013, 16:09 |
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#5 |
Retired Super Moderator
Bruno Santos
Join Date: Mar 2009
Location: Lisbon, Portugal
Posts: 10,974
Blog Entries: 45
Rep Power: 128 |
Greetings to all!
@Arjang: Well... it's possible to help you, but not with just this little amount of information . To understand what I mean, read this: http://www.cfd-online.com/Forums/ope...-get-help.html Because from the output you provided, the only thing that can be seen is that:
So, given the amount of available information, the only suggestion I can make is this - read this page: http://openfoamwiki.net/index.php/HowTo_debugging Best regards, Bruno
__________________
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November 5, 2013, 01:48 |
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#6 |
Member
Arjang Behnoud
Join Date: Oct 2012
Posts: 61
Rep Power: 13 |
Thanks Dear Bruno
I've solved the problem by using your tip. the problem was with mesh quality. best regards. Arjang |
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