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July 12, 2011, 04:44 |
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#21 |
Member
pere
Join Date: Mar 2011
Location: barcelona
Posts: 46
Rep Power: 15 |
ppuigdom@pirineus:/tmp/ppuigdom/snappy24_2/snappy24>`which mpirun` -np 2 `which foamExec` bash -c "ls -l"
0 constant log processor0 processor1 processor2 processor3 processor4 processor5 processor6 processor7 processor8 processor9 system MPI: could not run executable (case #3) MPI: No details available, no log files found Matat ppuigdom@pirineus:/tmp/ppuigdom/snappy24_2/snappy24>`which mpirun` -np 2 `which foamExec` `which bash` -c "ls -l" 0 constant log processor0 processor1 processor2 processor3 processor4 processor5 processor6 processor7 processor8 processor9 system MPI: could not run executable (case #3) MPI: No details available, no log files found Matat |
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July 12, 2011, 18:49 |
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#22 | |
Retired Super Moderator
Bruno Santos
Join Date: Mar 2009
Location: Lisbon, Portugal
Posts: 10,981
Blog Entries: 45
Rep Power: 128 |
Hi Pere,
It saddens me to say (write) this... but I don't know how to fix this problem I don't have access to a system that has SGIMPI and therefore I can't compare such installation to your installation The last advices I can think of are:
Bruno
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July 13, 2011, 05:25 |
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#23 |
Member
pere
Join Date: Mar 2011
Location: barcelona
Posts: 46
Rep Power: 15 |
Hi Bruno,
Thanks for all, but just one thing: Now the error has changed....I put /dummy_ instead of /dummy__ and now the error is : MPI: pirineus: 0x9d400004db872fa: buoyantBoussinesqPimpleFoam: symbol lookup error: /prod/OPENFOAM1.7.1/OpenFOAM-1.7.1-SGI/OpenFOAM-1.7.1/mpt-2.03/lib/libPstreamMPI: pirineus: 0x9d400004db872fa: .so: undefined symbol: _ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb MPI: could not run executable (case #4) Matat and when I made parallelTest: parallelTest: symbol lookup error: /prod/OPENFOAM1.7.1/OpenFOAM-1.7.1-SGI/OpenFOAM-1.7.1/mpt-2.03/lib/libPstream.so: undefined symbol: _ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb Do you know something about this? Thanks again |
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July 13, 2011, 16:48 |
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#24 |
Retired Super Moderator
Bruno Santos
Join Date: Mar 2009
Location: Lisbon, Portugal
Posts: 10,981
Blog Entries: 45
Rep Power: 128 |
Hi Pere,
This is getting weirder and weirder... but I think that the problem here is that it's expecting to find the dummy version to link to it OK, when in doubt, lets try to rebuild OpenFOAM once again. But before rebuilding, check if the following commands outputs the expected values: Code:
echo $WM_MPLIB #checking if the desired MPI library is going to get picked echo $WM_COMPILER #check if the compiler option is correct which gcc #check if the gcc binary is located where you expect it to be gcc -v #check if gcc is a version >= 4.3.2 which mpirun #check if the mpirun binary is the one you want Code:
foam wcleanAll wcleanLnIncludeAll ./Allwmake > make.log 2>&1 Good luck! Bruno
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July 28, 2011, 18:28 |
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#25 |
New Member
Anirban Jana
Join Date: Apr 2010
Location: Pittsburgh, PA, USA
Posts: 19
Rep Power: 16 |
Hi guys,
I am also trying to build OpenFOAM (2.0.0 not 1.7.1) with SGI MPT 2.03 and icc (not gcc). Good to see there is company. Thanks wyldcat for pointing me to Pere's two threads. Quick question Pere, it seems from the first post on this thread that you have built OpenFOAM with OpenMPI and now you want to run that build with SGI MPT. Did I get that right? If yes, then I would suggest you rebuilding OpenFOAM from scratch with SGI MPT. Thats what I am trying to do now. My thread is http://www.cfd-online.com/Forums/ope...pt-2-03-a.html Cheers Anirban |
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July 28, 2011, 20:53 |
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#26 |
New Member
Anirban Jana
Join Date: Apr 2010
Location: Pittsburgh, PA, USA
Posts: 19
Rep Power: 16 |
I see that Wyldcat also suggested a clean rebuild in the post just before. Thats the way to go
-A |
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July 29, 2011, 04:21 |
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#27 |
Member
pere
Join Date: Mar 2011
Location: barcelona
Posts: 46
Rep Power: 15 |
-hi anirban,
I've build OpenFOAM with openmpi and now I want to build it with mpt-2.03 but it seems to be hard.... |
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September 24, 2011, 08:57 |
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#28 |
Retired Super Moderator
Bruno Santos
Join Date: Mar 2009
Location: Lisbon, Portugal
Posts: 10,981
Blog Entries: 45
Rep Power: 128 |
News update about building with SGI MPT (or so I hope): http://www.cfd-online.com/Forums/ope...tml#post325458 post#7
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