[EternalSeekerX]

Hello friends,


So I'm trying to build SU2-7.1.1 from source on my Fedora 34 system. I run into this error:

[ai-fe@ai-workstation SU2-master]$ ./ninja -C buld install 
ninja: Entering directory `buld' 
[3/840] Compiling C++ object Common/src/libSU2Common.a.p/grid_movement_CGridMovement.cpp.o 
FAILED: Common/src/libSU2Common.a.p/grid_movement_CGridMovement.cpp.o  
c++ -ICommon/src/libSU2Common.a.p -ICommon/src -I../Common/src -I../externals/CLI11 -I../externals/cgns/adf -Iexternals/cgns -I../externals/cgns -I../externa
ls/metis/include -I../externals/metis/GKlib -I../externals/metis/libmetis -I../externals/parmetis/include -I../externals/parmetis/libparmetis -Iexternals/tec
io -I../externals/tecio -Iexternals/tecio/teciompisrc -I../externals/tecio/teciompisrc -I/usr/include/openmpi-x86_64 -fdiagnostics-color=always -pipe -D_FILE
_OFFSET_BITS=64 -std=c++11 -O3 -fPIC -pthread -Wno-empty-body -Wno-unused-parameter -Wno-deprecated-declarations -Wno-non-virtual-dtor -DHAVE_CGNS -DNDEBUG -
DUSE_MIXED_PRECISION -DHAVE_MPI -DHAVE_METIS -DHAVE_PARMETIS -DHAVE_TECIO -DTECIOMPI -DHAVE_BLAS -DHAVE_LAPACK -MD -MQ Common/src/libSU2Common.a.p/grid_movem
ent_CGridMovement.cpp.o -MF 'Common/src/libSU2Common.a.p/grid_movement_CGridMovement.cpp.o.d' -o Common/src/libSU2Common.a.p/grid_movement_CGridMovement.cpp.
o -c ../Common/src/grid_movement/CGridMovement.cpp 
In file included from ../Common/src/grid_movement/../../include/grid_movement/../geometry/CGeometry.hpp:54, 
                 from ../Common/src/grid_movement/../../include/grid_movement/CGridMovement.hpp:30, 
                 from ../Common/src/grid_movement/CGridMovement.cpp:28: 
../Common/src/grid_movement/../../include/grid_movement/../geometry/primal_grid/CPrimalGrid.hpp: In member function ‘virtual long unsigned int CPrimalGrid::G
etColor()’: 
../Common/src/grid_movement/../../include/grid_movement/../geometry/primal_grid/CPrimalGrid.hpp:242:61:error: ‘numeric_limits’ is not a member of ‘std’ 
  242 |   inline virtual unsigned long GetColor(void) { return std::numeric_limits<unsigned long>::max(); } 
      |                                                             ^~~~~~~~~~~~~~
../Common/src/grid_movement/../../include/grid_movement/../geometry/primal_grid/CPrimalGrid.hpp:242:76:error: expected primary-expression before ‘unsigned’ 
  242 |   inline virtual unsigned long GetColor(void) { return std::numeric_limits<unsigned long>::max(); } 
      |                                                                            ^~~~~~~~
../Common/src/grid_movement/../../include/grid_movement/../geometry/primal_grid/CPrimalGrid.hpp:242:76:error: expected ‘;’ before ‘unsigned’ 
../Common/src/grid_movement/../../include/grid_movement/../geometry/primal_grid/CPrimalGrid.hpp:242:89:error: expected unqualified-id before ‘>’ token 
  242 |   inline virtual unsigned long GetColor(void) { return std::numeric_limits<unsigned long>::max(); } 
      |                                                                                         ^
[12/840] Compiling C++ object externals/tecio/teciompisrc/libteciompi.a.p/SZLFEPartitionedZoneWriterMPI.cpp.o
ninja: build stopped: subcommand failed.

I don't know if this is a user error on my side or what? I am using Gcc-11.2 and running OpenMPI-4.1.0.


My meson command output was this:

[ai-fe@ai-workstation SU2-master]$ ./meson.py buld -Denable-autodiff=true -Denable-directdiff=true -Denable-pywrapper=true -Dwith-mpi=enabled -Denable-mixedp
rec=true -Denable-openblas=true -Dblas-name=blas --prefix=/home/ai-fe/.root/opt/SU2-Code/SU2-7.1.1
The Meson build system
Version: 0.54.999 
Source dir: /home/ai-fe/.root/opt/SU2-Code/SU2-master
Build dir: /home/ai-fe/.root/opt/SU2-Code/SU2-master/buld
Build type: native build
Project name: SU2
Project version: 7.1.1 "Blackbird"
C compiler for the host machine: cc (gcc 11.2.1 "cc (GCC) 11.2.1 20210728 (Red Hat 11.2.1-1)") 
C linker for the host machine: cc ld.bfd 2.35.1-41 
C++ compiler for the host machine: c++ (gcc 11.2.1 "c++ (GCC) 11.2.1 20210728 (Red Hat 11.2.1-1)") 
C++ linker for the host machine: c++ ld.bfd 2.35.1-41 
Host machine cpu family: x86_64
Host machine cpu: x86_64
Program python3 found: YES (/usr/bin/python3) 
Dependency mpi found: YES4.1.0(cached)
Dependency mpi found: YES4.1.0(cached)
Message: Boost sources found. 
Dependency blas found: YES3.9.0(cached)
Program swig found: YES (/usr/bin/swig) 
Message: Using mpi4py from /home/ai-fe/.local/lib/python3.9/site-packages/mpi4py/include 
Found pkg-config: /usr/bin/pkg-config (1.7.3) 
Dependency python found: YES (pkgconfig)
Program install.sh found: YES (/bin/sh /home/ai-fe/.root/opt/SU2-Code/SU2-master/SU2_PY/pySU2/install.sh) 
Message: ------------------------------------------------------------------------- 
         |    ___ _   _ ___                                                      | 
         |   / __| | | |_  )   Release 7.1.1 "Blackbird"                         | 
         |   \__ \ |_| |/ /                                                      | 
         |   |___/\___//___|   Meson Configuration Summary                       | 
         |                                                                       | 
         ------------------------------------------------------------------------- 
          
         Option          Value 
         --------------------- 
         TecIO:          true 
         CGNS:           true 
         AD (reverse):   true 
         AD (forward):   true 
         Python Wrapper: true 
         Intel-MKL:      false 
         OpenBlas:       true 
         PaStiX:         false 
         Mixed Float:    true 

         Please be sure to add the $SU2_HOME and $SU2_RUN environment variables, 
         and update your $PATH (and $PYTHONPATH if applicable) with $SU2_RUN 

         Based on the input to this configuration, add these lines to your .bashrc file: 

         export SU2_RUN=/home/ai-fe/.root/opt/SU2-Code/SU2-7.1.1/bin 
         export SU2_HOME=/home/ai-fe/.root/opt/SU2-Code/SU2-master 
         export PATH=$PATH:$SU2_RUN 
         export PYTHONPATH=$PYTHONPATH:$SU2_RUN 

         Use './ninja -C buld install' to compile and install SU2 

Build targets in project: 20

Found ninja-1.10.0.git at /home/ai-fe/.root/opt/SU2-Code/SU2-master/ninja

[pcg]

Oh that was a problem we had with gcc 11.
The develop branch will build.

[EternalSeekerX]

Originally Posted by pcg

Oh that was a problem we had with gcc 11.
The develop branch will build.

Hey thanks for the heads up, develop branch works, but for some reason I can get pastix 6 to work. I think I saw your reply in my github issue post. I am gonna be using su2 for external aerodynamic mostly, what am I missing if I don't use pastix support?

Thanks