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Old   September 23, 2013, 04:21
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  #561
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vincent
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Hi all

I would like to know if somebody have try to create breaking wave with wave2Foam.

BR

Vincent
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Old   September 24, 2013, 13:43
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  #562
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Niels Gjoel Jacobsen
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Hi Vince,

I term of references you can look in my thesis and our 2012 paper accompanying waves2Foam. Besides that, several people have been discussing breaking in this thread, and the references on the waves2Foam wiki might also be helpful.

Kind regards,

Niels
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Old   September 24, 2013, 23:05
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  #563
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Arthur Loginow
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Hello, I am trying to install waves2Foam but I am a beginner with both (OpenFOAM & Ubuntu), I am not quite sure what to do at this step

The output should be placed in FOAM_USER_APPBIN, so modify Make/files so it reads

waveFoam.C

EXE = $(FOAM_USER_APPBIN)/waveFoam


I assume that I have to write that at the console but just copy and paste? (I apologize if someone asked this at the past and I did not read it)
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Old   September 24, 2013, 23:06
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  #564
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Arthur Loginow
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Hello Vince, I will try to simulate waves and breaking waves as soon as I am able to install waves2Foam got tons of material about it
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Old   September 25, 2013, 10:31
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Arthur Loginow
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Can I install waves2Foam in OpenFOAM 2.2.1? At the list they do not have the new version, but I dont know if that is just because they have not made an update still
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Old   September 25, 2013, 15:45
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Arthur Loginow
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Someone has a tutorial case of waveFoam? I made some modifications to the interFoam case but I am not quite sure how to create the pistonboundary
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Old   September 25, 2013, 18:20
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  #567
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Niels Gjoel Jacobsen
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Hi Arthur,

Have you tried the tutorial folder on the svn repository for waves2Foam. You can easily check it out by following the instructions on the wiki.

Kind regards,

Niels
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Old   September 25, 2013, 18:44
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Arthur Loginow
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ngj thanks for your reply, I did not see that before, I will check them right now, once again thanks
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Old   September 26, 2013, 11:14
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  #569
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Pietro Danilo Tomaselli
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Hi Vince and Maralady,
As I already posted, I'm working on breaking waves. I'm trying to obtain the same results as Niels did. I hope to post here some results as soon possible, in order to share our ideas.
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Old   September 27, 2013, 08:48
Unhappy Can not run old waveFoam simulation
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David Long
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I did some wave simulation half a year ago using waves2Foam tool. Now for some reason I reinstalled OpenFoam and of course upgrade waves2Foam.

However, When running waveFoam on old version of wave simulation cases, it crashed after few seconds and the results looks unreasonable.

So I wonder, does the new Version have some important changes that I have to change the wave Properties?

Best,

David
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Old   September 27, 2013, 15:01
Default compilation problem on cluster
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Hi Niels,

Currently, I'm moving to cluster computing for simulation using waves2Foam.
I have some difficulty compiling waves2Foam on the cluster.
Available version of OpenFOAM is 2.1.0 on the cluster.
Compiling the wave2Foam library was a success.
The compilation fails for the solver, pre and post processing as follows:

FOR SOLVER :
Code:
=====================================
    COMPILE SOLVERS
=====================================
Making dependency list for source file waveFoam.C
SOURCE=waveFoam.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/transportModels -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/transportModels/incompressible/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/transportModels/interfaceProperties/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/turbulenceModels/incompressible/turbulenceModel -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -DOFVERSION=210 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamSampling/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/waveFoam.o
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude/readTimeControls.H: In function ‘int main(int, char**)’:
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude/readTimeControls.H:38: warning: unused variable ‘maxDeltaT’
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/transportModels -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/transportModels/incompressible/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/transportModels/interfaceProperties/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/turbulenceModels/incompressible/turbulenceModel -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -DOFVERSION=210 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamSampling/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/waveFoam.o -L/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib \
	     -ltwoPhaseInterfaceProperties -lincompressibleTransportModels -lincompressibleTurbulenceModel -lincompressibleRASModels -lincompressibleLESModels -lfiniteVolume -L/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/lib -lwaves2Foam -lwaves2FoamSampling -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/waveFoam
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/libincompressibleRASModels.so: undefined reference to `memcpy@GLIBC_2.14'
collect2: ld returned 1 exit status
make: *** [/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/waveFoam] Error 1
FOR PRE-PROCESSING:

Code:
=====================================
    COMPILE PRE-PROCESSING
=====================================
Making dependency list for source file faceSetToSTL.C
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/faceSetToSTL'
SOURCE=faceSetToSTL.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/triSurface/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/faceSetToSTL.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/triSurface/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/faceSetToSTL.o -L/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib \
	     -lOpenFOAM -ltriSurface -lfiniteVolume -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/faceSetToSTL
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/libOpenFOAM.so: undefined reference to `memcpy@GLIBC_2.14'
collect2: ld returned 1 exit status
make[1]: *** [/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/faceSetToSTL] Error 1
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/faceSetToSTL'
make: *** [faceSetToSTL] Error 2
Making dependency list for source file relaxationZoneLayout.C
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/relaxationZoneLayout'
SOURCE=relaxationZoneLayout.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -DOFVERSION=210 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/relaxationZoneLayout.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -DOFVERSION=210 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/relaxationZoneLayout.o -L/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib \
	     -lfiniteVolume -L/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/lib -lwaves2Foam -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/relaxationZoneLayout
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/libfiniteVolume.so: undefined reference to `memcpy@GLIBC_2.14'
collect2: ld returned 1 exit status
make[1]: *** [/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/relaxationZoneLayout] Error 1
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/relaxationZoneLayout'
make: *** [relaxationZoneLayout] Error 2
Making dependency list for source file setWaveField.C
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveField'
SOURCE=setWaveField.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -DOFVERSION=210 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/setWaveField.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -DOFVERSION=210 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/setWaveField.o -L/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib \
	     -lfiniteVolume -L/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/lib -lwaves2Foam -lwaves2FoamProcessing -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/setWaveField
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/libfiniteVolume.so: undefined reference to `memcpy@GLIBC_2.14'
collect2: ld returned 1 exit status
make[1]: *** [/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/setWaveField] Error 1
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveField'
make: *** [setWaveField] Error 2
Making dependency list for source file setWaveParameters.C
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveParameters'
SOURCE=setWaveParameters.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -DOFVERSION=210 -DEXTBRANCH=0 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude -I/apps/gsl/1.8/include -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/setWaveParameters.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -DOFVERSION=210 -DEXTBRANCH=0 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude -I/apps/gsl/1.8/include -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/setWaveParameters.o -L/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib \
	     -lfiniteVolume -L/apps/gsl/1.8/lib -lgsl -lgslcblas -L/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/lib -lwaves2Foam -lwaves2FoamProcessing -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/setWaveParameters
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/libfiniteVolume.so: undefined reference to `memcpy@GLIBC_2.14'
collect2: ld returned 1 exit status
make[1]: *** [/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/setWaveParameters] Error 1
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveParameters'
make: *** [setWaveParameters] Error 2
Making dependency list for source file waveGaugesNProbes.C
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/waveGaugesNProbes'
SOURCE=waveGaugesNProbes.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/triSurface/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude  -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/waveGaugesNProbes.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/triSurface/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/finiteVolume/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/src/waves2FoamProcessing/lnInclude  -IlnInclude -I. -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/waveGaugesNProbes.o -L/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib \
	     -lOpenFOAM -ltriSurface -lfiniteVolume -L/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/lib -lwaves2FoamProcessing -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/waveGaugesNProbes
/apps/OpenFOAM/2.1.0//OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/libOpenFOAM.so: undefined reference to `memcpy@GLIBC_2.14'
collect2: ld returned 1 exit status
make[1]: *** [/home/ehk112/OpenFOAM/ehk112-2.1.0/platforms/linux64GccDPOpt/bin/waveGaugesNProbes] Error 1
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.1.0/applications/utilities/waves2Foam/applications/utilities/preProcessing/waveGaugesNProbes'
make: *** [waveGaugesNProbes] Error 2
make: Target `application' not remade because of errors.
It would be grateful if you could take a look at the problem.

Kind regards,
katakgoreng
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Old   September 28, 2013, 19:43
Default
  #572
ngj
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Niels Gjoel Jacobsen
Join Date: Mar 2009
Location: Deltares, Delft, The Netherlands
Posts: 1,702
Rep Power: 27
ngj will become famous soon enoughngj will become famous soon enough
@Katakgoreng: You seem to be using a rather old version of glibc on the cluster. I would advice you to talk with your system administrator and ask, how OpenFoam was compiled in the first place.

@David: When you do not bother to give information on OpenFoam version, what you are trying to do in waves2Foam, and how the simulation crashes, nobody will have the slightest chance to help you. If you look on the wiki, and long list of changes between version is available. This might be helpful.

Kind regards,

Niels
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Old   October 4, 2013, 15:59
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Hi Niels,

In regards to compilation of waves2Foam on the cluster (red hat enterprise linux), I managed to compile the latest version of OpenFOAM (2.2.x) from the Centos - OpenFOAM built project.
I encounter another problem with the current waves2Foam compilation.

My current system is as follows:
Code:
Red Hat Enterprise Linux Server release 6.4 (Santiago)
Linux login-3 2.6.32-358.11.1.el6.x86_64 #1 SMP Wed May 15 10:48:38 EDT 2013 x86_64 x86_64 x86_64 GNU/Linux
The error code that I got:
Code:
=====================================
    COMPILE LIBRARY
=====================================
'/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/lib/libwaves2Foam.so' is up to date.
'/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/lib/libwaves2FoamProcessing.so' is up to date.
SOURCE=surfaceElevation/sampledSurfaceElevationFunctionObject/sampledSurfaceElevationFunctionObject.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -DOFVERSION=220 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/finiteVolume/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/meshTools/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/sampling/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/lagrangian/basic/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/fileFormats/lnInclude -I/apps/gsl/1.8/include -IlnInclude -I. -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OpenFOAM/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/sampledSurfaceElevationFunctionObject.o
In file included from /home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OpenFOAM/lnInclude/OutputFilterFunctionObject.H:225:0,
                 from surfaceElevation/sampledSurfaceElevationFunctionObject/sampledSurfaceElevationFunctionObject.H:43,
                 from surfaceElevation/sampledSurfaceElevationFunctionObject/sampledSurfaceElevationFunctionObject.C:27:
/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OpenFOAM/lnInclude/OutputFilterFunctionObject.C: In instantiation of ‘bool Foam::OutputFilterFunctionObject<OutputFilter>::timeSet() [with OutputFilter = Foam::sampledSurfaceElevation]’:
surfaceElevation/sampledSurfaceElevationFunctionObject/sampledSurfaceElevationFunctionObject.C:44:1:   required from here
/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OpenFOAM/lnInclude/OutputFilterFunctionObject.C:215:9: error: ‘class Foam::sampledSurfaceElevation’ has no member named ‘timeSet’
make: *** [Make/linux64GccDPOpt/sampledSurfaceElevationFunctionObject.o] Error 1

=====================================
    COMPILE SOLVERS
=====================================
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/transportModels -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/transportModels/incompressible/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/transportModels/interfaceProperties/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/turbulenceModels/incompressible/turbulenceModel -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/transportModels/twoPhaseMixture/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/finiteVolume/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/meshTools/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/fvOptions/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/sampling/lnInclude -DOFVERSION=220 -DEXTBRANCH=0 -DXVERSION=1 -I/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/src/waves2FoamSampling/lnInclude -IlnInclude -I. -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OpenFOAM/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/waveFoam.o -L/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/platforms/linux64GccDPOpt/lib \
	     -linterfaceProperties -ltwoPhaseInterfaceProperties -lincompressibleTransportModels -lincompressibleTurbulenceModel -lincompressibleRASModels -lincompressibleLESModels -lfiniteVolume -lmeshTools -lfvOptions -lsampling -L/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/lib -lwaves2Foam -lwaves2FoamSampling -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/waveFoam
/usr/bin/ld: cannot find -ltwoPhaseInterfaceProperties
collect2: error: ld returned 1 exit status
make: *** [/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/waveFoam] Error 1

=====================================
    COMPILE PRE-PROCESSING
=====================================
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/faceSetToSTL'
make[1]: `/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/faceSetToSTL' is up to date.
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/faceSetToSTL'
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/relaxationZoneLayout'
make[1]: `/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/relaxationZoneLayout' is up to date.
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/relaxationZoneLayout'
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveField'
make[1]: `/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/setWaveField' is up to date.
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveField'
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveParameters'
make[1]: `/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/setWaveParameters' is up to date.
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/setWaveParameters'
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/waveGaugesNProbes'
make[1]: `/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/waveGaugesNProbes' is up to date.
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/preProcessing/waveGaugesNProbes'

=====================================
    COMPILE POST-PROCESSING
=====================================
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/postProcessing/postProcessWaves2Foam'
make[1]: `/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/postProcessWaves2Foam' is up to date.
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/postProcessing/postProcessWaves2Foam'
make[1]: Entering directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/postProcessing/surfaceElevation'
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/finiteVolume/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/meshTools/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/sampling/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/lagrangian/basic/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/fileFormats/lnInclude -DOFVERSION=220 -DEXTBRANCH=0 -I/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/src/waves2Foam/lnInclude -I/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/src/waves2FoamSampling/lnInclude  -IlnInclude -I. -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OpenFOAM/lnInclude -I/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/surfaceElevation.o -L/home/ehk112/OpenFOAM/OpenFOAM-2.2.x/platforms/linux64GccDPOpt/lib \
	     -lfiniteVolume -lmeshTools -lsampling -lsurfMesh -ltriSurface -llagrangian -lfileFormats -L/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/lib -lwaves2Foam -lwaves2FoamSampling -lOpenFOAM -ldl   -lm -o /home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/surfaceElevation
/usr/bin/ld: cannot find -lwaves2FoamSampling
collect2: error: ld returned 1 exit status
make[1]: *** [/home/ehk112/OpenFOAM/ehk112-2.2.x/platforms/linux64GccDPOpt/bin/surfaceElevation] Error 1
make[1]: Leaving directory `/export71/home/ehk112/OpenFOAM/ehk112-2.2.x/applications/utilities/waves2Foam/applications/utilities/postProcessing/surfaceElevation'
make: *** [surfaceElevation] Error 2
make: Target `application' not remade because of errors.
Could you point to where I could have made mistakes.

Kind regards,
katakgoreng
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Old   October 5, 2013, 06:34
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  #574
ngj
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Niels Gjoel Jacobsen
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Good morning Katakgoreng,

For some reason it is not recognised that you are using the 2.2.x version, and I suspect that the compilation script thinks that you are using 2.2.0. This would explain the error in compiling the waves2FoamSampling library, because the function timeSet was introduced between the two versions mentioned above.

I would like to see the output of your environmental variables in waves2Foam and potential error messages bashrc script for waves2Foam, so could you please post everything that goes into log.compile, when you execute the compilation as follows:
Code:
./Allwmake > log.compile 2>&1
I suspect that the problem with the twoPhaseProperties is also related to a wrong identification of the solvers, because this might as well have changed between 2.2.x and 2.2.0. I believe it has been discussed above, but maintaining cross-version compatibility for the most recent releases has been a bit of a pain, so I am happy that you report these issues, since I only have 2.2.0 and 2.2.1 on my machine.

Kind regards,

Niels
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Old   October 7, 2013, 05:18
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Quote:
Originally Posted by ngj View Post
Good morning Katakgoreng,

For some reason it is not recognised that you are using the 2.2.x version, and I suspect that the compilation script thinks that you are using 2.2.0. This would explain the error in compiling the waves2FoamSampling library, because the function timeSet was introduced between the two versions mentioned above.

I would like to see the output of your environmental variables in waves2Foam and potential error messages bashrc script for waves2Foam, so could you please post everything that goes into log.compile, when you execute the compilation as follows:
Code:
./Allwmake > log.compile 2>&1
I suspect that the problem with the twoPhaseProperties is also related to a wrong identification of the solvers, because this might as well have changed between 2.2.x and 2.2.0. I believe it has been discussed above, but maintaining cross-version compatibility for the most recent releases has been a bit of a pain, so I am happy that you report these issues, since I only have 2.2.0 and 2.2.1 on my machine.

Kind regards,

Niels
Hi Niels,

The log files is as link below:
http://sdrv.ms/18Jq32A

Kind regards,
katakgoreng
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Old   October 7, 2013, 14:45
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  #576
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Niels Gjoel Jacobsen
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Hi Katakgoreng,

I have found a solution, so please make an update of your svn-repository. It turned out that I had forgotten to add the XVERSION-flag in the options files. This resolves the problem with compiling libwaves2FoamSampling.so.

With respect to the problem with compiling the solver, I have to come up with a solution. Up to know it has been enough to replace .x in 2.2.x with 2.2.0 and the solvers have been compatible. It turns out that the naming 2.2.x now refers to the git-version of 2.2.1, which requires another solver
This means basically that I will have to come up with a solution, such that the compilation structure is both back- and forward compatible. For now, I will kindly ask you to manually execute the following commands from the waves2Foam directory:

Code:
cd applications/solvers/solvers221/waveFoam
wclean
wmake
As the solver structure for 2.2.1. is actually working (i.e. compiling) with 2.2.x, this resolves your problem. I will think of a more permanent and automatic solution, but for now, this is a path forward.

Kind regards

Niels
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Old   October 8, 2013, 07:19
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Quote:
Originally Posted by ngj View Post
Hi Katakgoreng,

I have found a solution, so please make an update of your svn-repository. It turned out that I had forgotten to add the XVERSION-flag in the options files. This resolves the problem with compiling libwaves2FoamSampling.so.

With respect to the problem with compiling the solver, I have to come up with a solution. Up to know it has been enough to replace .x in 2.2.x with 2.2.0 and the solvers have been compatible. It turns out that the naming 2.2.x now refers to the git-version of 2.2.1, which requires another solver
This means basically that I will have to come up with a solution, such that the compilation structure is both back- and forward compatible. For now, I will kindly ask you to manually execute the following commands from the waves2Foam directory:

Code:
cd applications/solvers/solvers221/waveFoam
wclean
wmake
As the solver structure for 2.2.1. is actually working (i.e. compiling) with 2.2.x, this resolves your problem. I will think of a more permanent and automatic solution, but for now, this is a path forward.

Kind regards

Niels
Hi Niels,

Many thanks for your help. The problem was sorted out. I have managed to get wave2Foam up and running on the cluster.

Kind regards,
katakgoreng
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Old   October 9, 2013, 11:13
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Is there any way to check if I installed waveFoam correctly? As the same way I was able to check icoFoam -help when I installed OpenFOAM? I copied all the files as the wiki says but it doesn't recognize the waveFoam -help
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Old   October 9, 2013, 11:34
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Hello everyone,

It may be inappropriate for me to ask here. But this has troubled me for a long time. Sorry about this anyway.

My problem is I cannot make an animation out of the image files output from paraView, either using convert or ffmpeg. Does anyone has a solution for me? Thanks in advance.

Version: ImageMagick 6.6.9-7 2012-08-17 Q16 http://www.imagemagick.org
Copyright: Copyright (C) 1999-2011 ImageMagick Studio LLC
Features: OpenMP

ffmpeg version 0.8.5-4:0.8.5-0ubuntu0.12.04.1, Copyright (c) 2000-2012 the Libav developers


convert *.png movie.mpg

convert: delegate failed `"ffmpeg" -v -1 -mbd rd -trellis 2 -cmp 2 -subcmp 2 -g 300 -pass 1/2 -i "%M%%d.jpg" "%u.%m" 2> "%Z"' @ error/delegate.c/InvokeDelegate/1058.


When using ffmpeg -i animation*.jpg movie.mpeg, it gives lots of output in the terminal, but still cannot see anything in the video.

Stream #0.0 -> #80.0
Press ctrl-c to stop encoding
frame= 1 fps= 0 q=5.3 Lq=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3
...
q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=5.3 q=4.9 size= -0kB time=0.04 bitrate= -4.4kbits/s
video:3139kB audio:0kB global headers:0kB muxing overhead -100.000684%
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Old   October 9, 2013, 12:30
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  #580
ngj
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Niels Gjoel Jacobsen
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Hallo Arthur,

That would probably mean that the compilation of waves2Foam has not been successful. I have quickly tried on both OF1.6-ext and OF2.2.1, and on both versions the "-help" option works.

Have you been running any of the tutorials successfully? If no, then return to the compilation step.

Kind regards,

Niels
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