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Old   September 24, 2007, 11:20
Default Hello Forum, I am trying to
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Alessandro Spadoni
Join Date: Mar 2009
Location: Atlanta, GA
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Hello Forum,

I am trying to run a case in parallel. I can lamboot all the machines in my host file by issuing lamboot -v <file> and I get:

[gtg627eOpenFOAM@ruzzene03 turbFoam]$ lamboot -v machineNetwork

LAM 7.0.6/MPI 2 C++/ROMIO - Indiana University

n-1<27397> ssi:boot:base:linear: booting n0 (ruzzene03)
n-1<27397> ssi:boot:base:linear: booting n1 (ruzzene01)
n-1<27397> ssi:boot:base:linear: booting n2 (ruzzene02)
n-1<27397> ssi:boot:base:linear: booting n3 (ruzzene04)
n-1<27397> ssi:boot:base:linear: booting n4 (ruzzene05)
n-1<27397> ssi:boot:base:linear: booting n5 (ruzzene06)
n-1<27397> ssi:boot:base:linear: finished

------------------------------------------------

Then I issue:

mpirun --hostfile machineNetwork -np 12 turbFoam . AlexMovingMesh -parallel > log &

and I get:

[gtg627eOpenFOAM@ruzzene03 turbFoam]$ mpirun --hostfile machineNetwork -np 12 turbFoam . AlexMovingMesh -parallel > log &
[1] 27507
[gtg627eOpenFOAM@ruzzene03 turbFoam]$ bash: orted: command not found
bash: orted: command not found
bash: orted: command not found
bash: orted: command not found
bash: orted: command not found
[ruzzene03:27507] ERROR: A daemon on node ruzzene01 failed to start as expected.
[ruzzene03:27507] ERROR: There may be more information available from
[ruzzene03:27507] ERROR: the remote shell (see above).
[ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127.
[ruzzene03:27507] ERROR: A daemon on node ruzzene05 failed to start as expected.
[ruzzene03:27507] ERROR: There may be more information available from
[ruzzene03:27507] ERROR: the remote shell (see above).
[ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127.
[ruzzene03:27507] ERROR: A daemon on node ruzzene04 failed to start as expected.
[ruzzene03:27507] ERROR: There may be more information available from
[ruzzene03:27507] ERROR: the remote shell (see above).
[ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127.
[ruzzene03:27507] ERROR: A daemon on node ruzzene02 failed to start as expected.
[ruzzene03:27507] ERROR: There may be more information available from
[ruzzene03:27507] ERROR: the remote shell (see above).
[ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127.
[ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 275
[ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1164
[ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file errmgr_hnp.c at line 90
[ruzzene03:27507] ERROR: A daemon on node ruzzene06 failed to start as expected.
[ruzzene03:27507] ERROR: There may be more information available from
[ruzzene03:27507] ERROR: the remote shell (see above).
[ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127.
[ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 188
[ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1196
--------------------------------------------------------------------------
mpirun was unable to cleanly terminate the daemons for this job. Returned value Timeout instead of ORTE_SUCCESS.

--------------------------------------------------------------------------

Does anybody know what might cause this error?
Is it possible that my bashrc file is not providing a correct path to OpenFOAM/OpenFOAM-1.4.1/src/openmpi-1.2.3/orte ?

Thank you in advance,

Alessandro Spadoni
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