[swak4Foam] Contrib/swak4Foam

Djub · June 15, 2012, 11:51

Hi,

sorry for that very low skilled question, but I don't succeed on myself...

How to install and work with the library swak4Foam ?

Hot link: http://openfoamwiki.net/index.php/Contrib/swak4Foam

I just don't what to do. I tried on my own but nothing really good...

Can anybody "give me his hand" with a step-by-step help ?

gschaider · June 15, 2012, 14:39

Quote:

Originally Posted by Djub

Hi,

sorry for that very low skilled question, but I don't succeed on myself...

How to install and work with the library swak4Foam ?

Hot link: http://openfoamwiki.net/index.php/Contrib/swak4Foam

I just don't what to do. I tried on my own but nothing really good...

Can anybody "give me his hand" with a step-by-step help ?

Could you please be more specific where you're having the problems? Download it as described in http://openfoamwiki.net/index.php/Co...am#Downloading Then go to the README-file as indicated there (Basically all you've got to do is say ./Allwmake in the right directory)

Djub · June 18, 2012, 04:09

After executing
svn checkout https://openfoam-extend.svn.sourceforge.net/svnroot/openfoam-extend/trunk/Breeder_2.0/libraries/swak4Foam/ ,
I typed ./Allwmake

The first lines were:

Code:

No 'swakConfiguration'. Python etc won't work
Checking swak4Foam-version and generating file
Bison is version 2.4.1
OpenFOAM-version: Major 2 Minor 0 Patch 1

The last lines were:

Code:

 
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libmeshTools.so: undefined reference to `Foam::triSurface::writeStats(Foam::Ostream&) const'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libmeshTools.so: undefined reference to `Foam::triSurface::clearOut()'
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

gschaider · June 18, 2012, 05:32

Quote:

Originally Posted by Djub

After executing
svn checkout https://openfoam-extend.svn.sourceforge.net/svnroot/openfoam-extend/trunk/Breeder_2.0/libraries/swak4Foam/ ,
I typed ./Allwmake

The first lines were:

Code:

No 'swakConfiguration'. Python etc won't work
Checking swak4Foam-version and generating file
Bison is version 2.4.1
OpenFOAM-version: Major 2 Minor 0 Patch 1

The last lines were:

Code:

 
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libmeshTools.so: undefined reference to `Foam::triSurface::writeStats(Foam::Ostream&) const'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libmeshTools.so: undefined reference to `Foam::triSurface::clearOut()'
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

Let's accentuate the positive

: the stuff in Libraries compiled and linked OK?

Yours is a fairly recent Linux, right? There has been a change in the linker where dynamic links are not implicitly linked anymore and my suspicion is that this is the case here.

Try the following: in Utilities/replayTransientBC/Make/options change the line

-lmeshTools

to

-lmeshTools -ltriSurface

and see if anything changes

Djub · June 18, 2012, 05:45

Nothing better:

Code:

No 'swakConfiguration'. Python etc won't work
Checking swak4Foam-version and generating file
Bison is version 2.4.1
OpenFOAM-version: Major 2 Minor 0 Patch 1
No change to swak4FoamParsers/foamVersion4swak.H
'/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/lib/libswak4FoamParsers.so' is up to date.
'/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/lib/libgroovyBC.so' is up to date.
SOURCE=swakCodedFunctionObject.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100    -I../swak4FoamParsers/lnInclude -I/opt/openfoam201/src/finiteVolume/lnInclude -I/opt/openfoam201/src/meshTools/lnInclude -I/opt/openfoam201/src/sampling/lnInclude -I/opt/openfoam201/src/triSurface/lnInclude -I/opt/openfoam201/src//postProcessing/functionObjects/utilities/lnInclude -I/opt/openfoam201/src/lagrangian/basic/lnInclude  -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/swakCodedFunctionObject.o

and at the end:

Code:

/opt/openfoam201/platforms/linux64GccDPOpt/lib/libfiniteVolume.so: undefined reference to `Foam::reduce(double&, Foam::sumOp<double> const&)'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libOpenFOAM.so: undefined reference to `Foam::UPstream::addValidParOptions(Foam::HashTable<Foam::string, Foam::word, Foam::string::hash>&)'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libOpenFOAM.so: undefined reference to `Foam::UPstream::exit(int)'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libfiniteVolume.so: undefined reference to `Foam::UOPstream::write(Foam::UPstream::commsTypes, int, char const*, long, int)'
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

When I run my case, it does not work:

Code:

 
--> FOAM FATAL IO ERROR: 
Unknown patchField type groovyBC for patch type patch
Valid patchField types are :
...

Some help?

gschaider · June 18, 2012, 06:14

Quote:

Originally Posted by Djub

Nothing better:

Code:

No 'swakConfiguration'. Python etc won't work
Checking swak4Foam-version and generating file
Bison is version 2.4.1
OpenFOAM-version: Major 2 Minor 0 Patch 1
No change to swak4FoamParsers/foamVersion4swak.H
'/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/lib/libswak4FoamParsers.so' is up to date.
'/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/lib/libgroovyBC.so' is up to date.
SOURCE=swakCodedFunctionObject.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100    -I../swak4FoamParsers/lnInclude -I/opt/openfoam201/src/finiteVolume/lnInclude -I/opt/openfoam201/src/meshTools/lnInclude -I/opt/openfoam201/src/sampling/lnInclude -I/opt/openfoam201/src/triSurface/lnInclude -I/opt/openfoam201/src//postProcessing/functionObjects/utilities/lnInclude -I/opt/openfoam201/src/lagrangian/basic/lnInclude  -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/swakCodedFunctionObject.o

and at the end:

Code:

/opt/openfoam201/platforms/linux64GccDPOpt/lib/libfiniteVolume.so: undefined reference to `Foam::reduce(double&, Foam::sumOp<double> const&)'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libOpenFOAM.so: undefined reference to `Foam::UPstream::addValidParOptions(Foam::HashTable<Foam::string, Foam::word, Foam::string::hash>&)'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libOpenFOAM.so: undefined reference to `Foam::UPstream::exit(int)'
/opt/openfoam201/platforms/linux64GccDPOpt/lib/libfiniteVolume.so: undefined reference to `Foam::UOPstream::write(Foam::UPstream::commsTypes, int, char const*, long, int)'
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

When I run my case, it does not work:

Code:

 
--> FOAM FATAL IO ERROR: 
Unknown patchField type groovyBC for patch type patch
Valid patchField types are :
...

Some help?

In fact that IS better because there is a new error (which means we're on the right track). Try adding "-lPStream" to that line.

Anyway: what kind of Linux are you using (my prejudices say "Ubuntu") and could you check which versions are the dynamic linker and the compiler ("ld -V" and "gcc -v" give you that information)

For the groovyBC-problem: there must be something about a dynamic-lib not loading further up in the output

Djub · June 18, 2012, 07:05

Bernhard , thanks a lot. I don't know what I'd do without your kind help.

About my installation:

Linux version:
SUSE LINUX
Release 11.4 (Celadon)
Kernel Linux 2.6.37.1-1.2-desktop
GNOME 2.32.1

Code:

ld -V
GNU ld (GNU Binutils; openSUSE 11.4) 2.21

Code:

gcc -v
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib64/gcc/x86_64-suse-linux/4.5/lto-wrapper
Target: x86_64-suse-linux
Configured with: ../configure --prefix=/usr --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/lib64 --libexecdir=/usr/lib64 --enable-languages=c,c++,objc,fortran,obj-c++,java,ada --enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.5 --enable-ssp --disable-libssp --disable-plugin --with-bugurl=http://bugs.opensuse.org/ --with-pkgversion='SUSE Linux' --disable-libgcj --disable-libmudflap --with-slibdir=/lib64 --with-system-zlib --enable-__cxa_atexit --enable-libstdcxx-allocator=new --disable-libstdcxx-pch --enable-version-specific-runtime-libs --program-suffix=-4.5 --enable-linux-futex --without-system-libunwind --enable-gold --with-plugin-ld=/usr/bin/gold --with-arch-32=i586 --with-tune=generic --build=x86_64-suse-linux
Thread model: posix
gcc version 4.5.1 20101208 [gcc-4_5-branch revision 167585] (SUSE Linux)

About ./allMake :

Beginning:

Code:

 
No 'swakConfiguration'. Python etc won't work
Checking swak4Foam-version and generating file
Bison is version 2.4.1
OpenFOAM-version: Major 2 Minor 0 Patch 1
No swak4FoamParsers/foamVersion4swak.H. Generated
wmakeLnInclude: linking include files to ./lnInclude
Making dependency list for source file printSwakVersion.C
Making dependency list for source file SurfacesRepository.C
Making dependency list for source file SetsRepository.C
Making dependency list for source file GlobalVariablesRepository.C
Making dependency list for source file ExpressionDriverWriter.C
Making dependency list for source file ExpressionResult.C
Making dependency list for source file StoredExpressionResult.C
Making dependency list for source file swakRegistryProxySurface.C
Making dependency list for source file swakRegistryProxySet.C
Making dependency list for source file FieldValueExpressionParser.yy
could not open file FieldValueExpressionParser.tab.hh for source file FieldValueExpressionParser.yy
could not open file FixedValuePointPatchField.H for source file FieldValueExpressionParser.yy
could not open file ZeroGradientPointPatchField.H for source file FieldValueExpressionParser.yy
could not open file CalculatedPointPatchField.H for source file FieldValueExpressionParser.yy

Ending:

Code:

SOURCE=replayTransientBC.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/openfoam201/src/cfdTools/lnInclude -I/opt/openfoam201/src/cfdTools/general/lnInclude   -I/opt/openfoam201/src/finiteVolume/lnInclude   -I/opt/openfoam201/src/meshTools/lnInclude -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/replayTransientBC.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/openfoam201/src/cfdTools/lnInclude -I/opt/openfoam201/src/cfdTools/general/lnInclude   -I/opt/openfoam201/src/finiteVolume/lnInclude   -I/opt/openfoam201/src/meshTools/lnInclude -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed Make/linux64GccDPOpt/replayTransientBC.o -L/opt/openfoam201/platforms/linux64GccDPOpt/lib \
     -lfiniteVolume -lmeshTools -ltriSurface -lPStream -lOpenFOAM -ldl   -lm -o /home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC
/usr/lib64/gcc/x86_64-suse-linux/4.5/../../../../x86_64-suse-linux/bin/ld: cannot find -lPStream
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

Just to ckeck: you meant "lPStream", with an l like lambda (lowercase) then P like principle (uppercase) ?

gschaider · June 18, 2012, 09:32

Quote:

Originally Posted by Djub

Bernhard , thanks a lot. I don't know what I'd do without your kind help.

About my installation:

Linux version:
SUSE LINUX
Release 11.4 (Celadon)
Kernel Linux 2.6.37.1-1.2-desktop
GNOME 2.32.1

Code:

ld -V
GNU ld (GNU Binutils; openSUSE 11.4) 2.21

Code:

gcc -v
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib64/gcc/x86_64-suse-linux/4.5/lto-wrapper
Target: x86_64-suse-linux
Configured with: ../configure --prefix=/usr --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/lib64 --libexecdir=/usr/lib64 --enable-languages=c,c++,objc,fortran,obj-c++,java,ada --enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.5 --enable-ssp --disable-libssp --disable-plugin --with-bugurl=http://bugs.opensuse.org/ --with-pkgversion='SUSE Linux' --disable-libgcj --disable-libmudflap --with-slibdir=/lib64 --with-system-zlib --enable-__cxa_atexit --enable-libstdcxx-allocator=new --disable-libstdcxx-pch --enable-version-specific-runtime-libs --program-suffix=-4.5 --enable-linux-futex --without-system-libunwind --enable-gold --with-plugin-ld=/usr/bin/gold --with-arch-32=i586 --with-tune=generic --build=x86_64-suse-linux
Thread model: posix
gcc version 4.5.1 20101208 [gcc-4_5-branch revision 167585] (SUSE Linux)

OK. That's not as bleeding edge as I suspected

Quote:

Originally Posted by Djub

About ./allMake :

Beginning:

Code:

 
No 'swakConfiguration'. Python etc won't work
Checking swak4Foam-version and generating file
Bison is version 2.4.1
OpenFOAM-version: Major 2 Minor 0 Patch 1
No swak4FoamParsers/foamVersion4swak.H. Generated
wmakeLnInclude: linking include files to ./lnInclude
Making dependency list for source file printSwakVersion.C
Making dependency list for source file SurfacesRepository.C
Making dependency list for source file SetsRepository.C
Making dependency list for source file GlobalVariablesRepository.C
Making dependency list for source file ExpressionDriverWriter.C
Making dependency list for source file ExpressionResult.C
Making dependency list for source file StoredExpressionResult.C
Making dependency list for source file swakRegistryProxySurface.C
Making dependency list for source file swakRegistryProxySet.C
Making dependency list for source file FieldValueExpressionParser.yy
could not open file FieldValueExpressionParser.tab.hh for source file FieldValueExpressionParser.yy
could not open file FixedValuePointPatchField.H for source file FieldValueExpressionParser.yy
could not open file ZeroGradientPointPatchField.H for source file FieldValueExpressionParser.yy
could not open file CalculatedPointPatchField.H for source file FieldValueExpressionParser.yy

But the libraries are alright? (you should see lines like "'..../libgroovyBC.so' is up to date")

Quote:

Originally Posted by Djub

Ending:

Code:

SOURCE=replayTransientBC.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/openfoam201/src/cfdTools/lnInclude -I/opt/openfoam201/src/cfdTools/general/lnInclude   -I/opt/openfoam201/src/finiteVolume/lnInclude   -I/opt/openfoam201/src/meshTools/lnInclude -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/replayTransientBC.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/openfoam201/src/cfdTools/lnInclude -I/opt/openfoam201/src/cfdTools/general/lnInclude   -I/opt/openfoam201/src/finiteVolume/lnInclude   -I/opt/openfoam201/src/meshTools/lnInclude -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed Make/linux64GccDPOpt/replayTransientBC.o -L/opt/openfoam201/platforms/linux64GccDPOpt/lib \
     -lfiniteVolume -lmeshTools -ltriSurface -lPStream -lOpenFOAM -ldl   -lm -o /home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC
/usr/lib64/gcc/x86_64-suse-linux/4.5/../../../../x86_64-suse-linux/bin/ld: cannot find -lPStream
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

Just to ckeck: you meant "lPStream", with an l like lambda (lowercase) then P like principle (uppercase) ?

Exactly. Except that I mistyped and the "S" should be lowercase ( -lPstream)

Djub · June 18, 2012, 10:13

At the beginning, I can read:

Code:

.../libsimpleFunctionObjects.so' is up to date.
.../libsimpleSwakFunctionObjects.so' is up to date.
.../libswakTopoSources.so' is up to date.
.../libswakSourceFields.so' is up to date.
.../libgroovyStandardBCs.so' is up to date.

But the end:

Code:

collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/funkySetFields] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/funkySetFields'
make: *** [funkySetFields] Error 2
make[1]: Entering directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/openfoam201/src/cfdTools/lnInclude -I/opt/openfoam201/src/cfdTools/general/lnInclude   -I/opt/openfoam201/src/finiteVolume/lnInclude   -I/opt/openfoam201/src/meshTools/lnInclude -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed Make/linux64GccDPOpt/replayTransientBC.o -L/opt/openfoam201/platforms/linux64GccDPOpt/lib \
     -lfiniteVolume -lmeshTools -ltriSurface -lPstream -lOpenFOAM -ldl   -lm -o /home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC
/usr/lib64/gcc/x86_64-suse-linux/4.5/../../../../x86_64-suse-linux/bin/ld: cannot find -lPstream
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

But it still doesn't work:

Code:

--> FOAM FATAL IO ERROR: 
Unknown patchField type groovyBC for patch type patch

gschaider · June 18, 2012, 14:37

Quote:

Originally Posted by Djub

At the beginning, I can read:

Code:

.../libsimpleFunctionObjects.so' is up to date.
.../libsimpleSwakFunctionObjects.so' is up to date.
.../libswakTopoSources.so' is up to date.
.../libswakSourceFields.so' is up to date.
.../libgroovyStandardBCs.so' is up to date.

But the end:

Code:

collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/funkySetFields] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/funkySetFields'
make: *** [funkySetFields] Error 2
make[1]: Entering directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/openfoam201/src/cfdTools/lnInclude -I/opt/openfoam201/src/cfdTools/general/lnInclude   -I/opt/openfoam201/src/finiteVolume/lnInclude   -I/opt/openfoam201/src/meshTools/lnInclude -IlnInclude -I. -I/opt/openfoam201/src/OpenFOAM/lnInclude -I/opt/openfoam201/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed Make/linux64GccDPOpt/replayTransientBC.o -L/opt/openfoam201/platforms/linux64GccDPOpt/lib \
     -lfiniteVolume -lmeshTools -ltriSurface -lPstream -lOpenFOAM -ldl   -lm -o /home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC
/usr/lib64/gcc/x86_64-suse-linux/4.5/../../../../x86_64-suse-linux/bin/ld: cannot find -lPstream
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.0.1/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/openfoam201/Telechargements/swak4Foam/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

The library should be in $FOAM_MPI_LIBBIN. Check with
ls $FOAM_MPI_LIBBIN
whether this is set on your system. If yes: add
-L$(FOAM_MPI_LIBBIN)
at the start(!) of the line you've already been editing in Make/options

This is not my fault. The binary distro you're using (I assume from the path that you didn't compile OF yourself) seems to be broken for compilations

Quote:

Originally Posted by Djub

But it still doesn't work:

Code:

--> FOAM FATAL IO ERROR: 
Unknown patchField type groovyBC for patch type patch

I guess you added groovyBC to the libs-list in the controlDict, right? In that case check further up in the solver output: there should be some error about not being able to load it. If not recheck the libs-entry

Djub · June 19, 2012, 04:10

Hi Bernhard!
OK. I understood that you think my installation is not as "clean" as possible.
So I will try to reinstall everything.
Right now, I am updating my system (zipper, yast,...), and then, I will fallow the instructions of http://www.openfoam.org/download/suse.php
Does it sounds good for you? Do you think I am in the correct path?

Djub · June 19, 2012, 05:53

I just installed OpenFOAM-2.1.0 from http://sourceforge.net/projects/foam/files/foam/suse/11.4/x86_64/
('cause my suse version is only 11.4).
I fallowed the instruction of official OpenFOAM page http://www.openfoam.org/download/suse.php
(rpm-i ... user configuration ... check on icofoam)
.

Then, I ran svn on swak4Foam .

And then ./Allwmake. Still the same problem. I added
-lmeshTools -ltriSurface -lPstream but it still dosn't work:

Code:

collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.1.0/platforms/linux64GccDPOpt/bin/funkySetFields] Error 1
make[1]: Leaving directory `/opt/OpenFOAM-2.1.0/Telechargements/swak4Foam/Utilities/funkySetFields'
make: *** [funkySetFields] Error 2
make[1]: Entering directory `/opt/OpenFOAM-2.1.0/Telechargements/swak4Foam/Utilities/replayTransientBC'
SOURCE=replayTransientBC.C ;  g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/OpenFOAM-2.1.0/src/cfdTools/lnInclude -I/opt/OpenFOAM-2.1.0/src/cfdTools/general/lnInclude   -I/opt/OpenFOAM-2.1.0/src/finiteVolume/lnInclude   -I/opt/OpenFOAM-2.1.0/src/meshTools/lnInclude -IlnInclude -I. -I/opt/OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/opt/OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -c $SOURCE -o Make/linux64GccDPOpt/replayTransientBC.o
g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3  -DNoRepository -ftemplate-depth-100 -I/opt/OpenFOAM-2.1.0/src/cfdTools/lnInclude -I/opt/OpenFOAM-2.1.0/src/cfdTools/general/lnInclude   -I/opt/OpenFOAM-2.1.0/src/finiteVolume/lnInclude   -I/opt/OpenFOAM-2.1.0/src/meshTools/lnInclude -IlnInclude -I. -I/opt/OpenFOAM-2.1.0/src/OpenFOAM/lnInclude -I/opt/OpenFOAM-2.1.0/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/replayTransientBC.o -L/opt/OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib \
     -lfiniteVolume -lmeshTools -ltriSurface -lPstream -lOpenFOAM -ldl   -lm -o /home/meteodyn/OpenFOAM/meteodyn-2.1.0/platforms/linux64GccDPOpt/bin/replayTransientBC
/usr/lib64/gcc/x86_64-suse-linux/4.5/../../../../x86_64-suse-linux/bin/ld: cannot find -lPstream
collect2: ld returned 1 exit status
make[1]: *** [/home/meteodyn/OpenFOAM/meteodyn-2.1.0/platforms/linux64GccDPOpt/bin/replayTransientBC] Error 1
make[1]: Leaving directory `/opt/OpenFOAM-2.1.0/Telechargements/swak4Foam/Utilities/replayTransientBC'
make: *** [replayTransientBC] Error 2
make: Target `application' not remade because of errors.

What should I do to use your nice suiss knife? It seems necessary for my case...

gschaider · June 19, 2012, 15:01

Quote:

Originally Posted by Djub

Hi Bernhard!
OK. I understood that you think my installation is not as "clean" as possible.
So I will try to reinstall everything.
Right now, I am updating my system (zipper, yast,...), and then, I will fallow the instructions of http://www.openfoam.org/download/suse.php
Does it sounds good for you? Do you think I am in the correct path?

I THINK the problem is that the binary version of OF you're using is somehow a bit misconfigured for compilation (basically the flags miss a -L-option). Reinstalling won't fix that i'm afraid. Have you ever tried compiling other OF-software and did that work?

wyldckat · June 19, 2012, 17:38

Greetings to all!

@Julien: I've just now finished testing on openSUSE 11.4 x86_64 with the RPM packages of OpenFOAM 2.1.0 and had no problems at all!
My guess is that the problem you're having is due to placing swak4Foam's code in the folder "/opt/OpenFOAM-2.1.0/Telechargements/swak4Foam"

.

After the OpenFOAM environment was ready to be used, I did:

Code:

mkdir -p $FOAM_RUN
run
svn checkout https://openfoam-extend.svn.sourceforge.net/svnroot/openfoam-extend/trunk/Breeder_2.0/libraries/swak4Foam/
cd swak4Foam
export WM_NCOMPPROCS=4
./Allwmake
./Allwmake

The "WM_NCOMPPROCS" is for using 4 cores for faster building. Ran a second time the Allwmake command just to know if all was built successfully and it was all OK! I didn't need to change anything in swak4Foam's code!

Best regards,
Bruno

Djub · June 20, 2012, 03:59

(Thanks everybody! I really appreciate your kind help !)

OK, I apologize. I wanted to make it nice, so I made a special folder for the downloads, in order not to "mix" everything, but know I know I was totally wrong...
Nevertheless, I did not understand from which cwd I should launch svn ?

gschaider · June 20, 2012, 05:11

Quote:

Originally Posted by Djub

(Thanks everybody! I really appreciate your kind help !)

OK, I apologize. I wanted to make it nice, so I made a special folder for the downloads, in order not to "mix" everything, but know I know I was totally wrong...
Nevertheless, I did not understand from which cwd I should launch svn ?

As long as you don't want to compile your own software that is based on swak or if you don't want to use the swakCoded-functionObject this doesn't matter

Djub · June 20, 2012, 05:33

Know, swak4foam is in /home/me/OpenFOAM/me-2.1.0/run
So, I made
cd swak4Foam/
./Alwmake
There is still the errors.

Djub · June 20, 2012, 10:38

Bernhard, Bruno ,

thanks a lot

. I think I found.

Compiling problems:
I had to change several /Make/option files:

for funkyDoCalc , funkySetBoundaryField and funkySetFields, I added the libraries -ltriSurface -lsampling -llagrangian -lPstream -lfileFormats -lsurfMesh -lconversion
for replayTransientBC , only -ltriSurface and -lPstream

BUT I had ALSO to move
/opt/OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/dummy/libPstrem.so
to
/opt/OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/
(??? Why was it in a "dummy" folder ???)

Now it's working! 'hope my post could help somebody else...

Bernhard: updateded my controlDict . I works now.

Once again, thanks a lot !

PS: do you think I should post a nethreaded, clean, in order to share my solution without all the rough exchanges with no interest?

gschaider · June 20, 2012, 12:48

Got to catch this quickly before Bruno does. He's only 19 posts behind me and at the rate he's posting my estimate is that he'll overtake me before the weekend

Quote:

Originally Posted by Djub

Bernhard, Bruno ,

thanks a lot

. I think I found.

Compiling problems:
I had to change several /Make/option files:

for funkyDoCalc , funkySetBoundaryField and funkySetFields, I added the libraries -ltriSurface -lsampling -llagrangian -lPstream -lfileFormats -lsurfMesh -lconversion
for replayTransientBC , only -ltriSurface and -lPstream

BUT I had ALSO to move
/opt/OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/dummy/libPstrem.so
to
/opt/OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/
(??? Why was it in a "dummy" folder ???)

The dummy-folder holds a non-parallelized version of Pstream that is only needed to bootstrap the compilation process of OpenFOAM. Usually there should be another folder named after you mpi-implementation (openmpi-1.5 or so) with the correct Pstream (the variable $FOAM_MPI_LIBBIN points to it).
Not sure whether your stuff will no work in parallel

Quote:

Originally Posted by Djub

Now it's working! 'hope my post could help somebody else...

Bernhard: updateded my controlDict . I works now.

Once again, thanks a lot !

PS: do you think I should post a nethreaded, clean, in order to share my solution without all the rough exchanges with no interest?

Would be nice to have a bug-report on the mantis with the changes required to Make/options so that it will get into the next release. The Pstream-moving .... I still think that this is a problem of the binaries you installed

wyldckat · June 20, 2012, 16:16

Hi Bernhard and Julien,

@Bernhard:

Quote:

Originally Posted by gschaider

Got to catch this quickly before Bruno does. He's only 19 posts behind me and at the rate he's posting my estimate is that he'll overtake me before the weekend

What can I say, I'm helping people on the forum instead of playing WoW

(And I got my powers upgraded a week and a half ago

nothing like whirling an axe at a spammer

)

@Julien: OK, having to hack around in OpenFOAM's installation folder, usually can only mean one thing: you've got a contaminated shell environment. Let me explain: your "$HOME/.bashrc" probably has something like this:

Code:

source /opt/OpenFOAM-2.0.1/etc/bashrc
source /opt/OpenFOAM-2.1.0/etc/bashrc

When you should have something this:

Code:

alias of201='source /opt/OpenFOAM-2.0.1/etc/bashrc'
alias of210='source /opt/OpenFOAM-2.1.0/etc/bashrc'

The alias commands create command shortcuts, namely the newly created aliases of201 and of210.
Now, whenever you start a new terminal window/tab, you should run only one of the aliases above:

In a new terminal where you need OpenFOAM 2.0.1, run:
Code:
```
of201
```
In a new terminal where you need OpenFOAM 2.1.0, run:
Code:
```
of210
```
If you need to switch between versions inside the same terminal, here's what you do to switch from 2.1.0 to 2.0.1:
Code:
```
wmUNSET
of210
```

The other possibility is that you might have skipped some important step... for example, might not have installed Open-MPI - what does this command output:

Code:

mpirun --version

Best regards,
Bruno

June 15, 2012, 11:51	Contrib/swak4Foam	#1
Djub Senior Member Julien Join Date: Jun 2012 Location: France Posts: 152 Rep Power: 13	Hi, sorry for that very low skilled question, but I don't succeed on myself... How to install and work with the library swak4Foam ? Hot link: http://openfoamwiki.net/index.php/Contrib/swak4Foam I just don't what to do. I tried on my own but nothing really good... Can anybody "give me his hand" with a step-by-step help ?

June 19, 2012, 04:10		#11
Djub Senior Member Julien Join Date: Jun 2012 Location: France Posts: 152 Rep Power: 13	Hi Bernhard! OK. I understood that you think my installation is not as "clean" as possible. So I will try to reinstall everything. Right now, I am updating my system (zipper, yast,...), and then, I will fallow the instructions of http://www.openfoam.org/download/suse.php Does it sounds good for you? Do you think I am in the correct path? Last edited by Djub; June 19, 2012 at 05:54. Reason: mystake

June 19, 2012, 17:38		#14
wyldckat Retired Super Moderator Bruno Santos Join Date: Mar 2009 Location: Lisbon, Portugal Posts: 10,975 Blog Entries: 45 Rep Power: 128	Greetings to all! @Julien: I've just now finished testing on openSUSE 11.4 x86_64 with the RPM packages of OpenFOAM 2.1.0 and had no problems at all! My guess is that the problem you're having is due to placing swak4Foam's code in the folder "/opt/OpenFOAM-2.1.0/Telechargements/swak4Foam" . After the OpenFOAM environment was ready to be used, I did: Code: mkdir -p $FOAM_RUN run svn checkout https://openfoam-extend.svn.sourceforge.net/svnroot/openfoam-extend/trunk/Breeder_2.0/libraries/swak4Foam/ cd swak4Foam export WM_NCOMPPROCS=4 ./Allwmake ./Allwmake The "WM_NCOMPPROCS" is for using 4 cores for faster building. Ran a second time the Allwmake command just to know if all was built successfully and it was all OK! I didn't need to change anything in swak4Foam's code! Best regards, Bruno __________________ OpenFOAM: FAQ \| Getting started Forum: How to get help, to post code/output and forum guide Read this before sending me PM

June 20, 2012, 10:38	It works now !	#18
Djub Senior Member Julien Join Date: Jun 2012 Location: France Posts: 152 Rep Power: 13	Bernhard, Bruno , thanks a lot . I think I found. Compiling problems: I had to change several /Make/option files: for funkyDoCalc , funkySetBoundaryField and funkySetFields, I added the libraries -ltriSurface -lsampling -llagrangian -lPstream -lfileFormats -lsurfMesh -lconversion for replayTransientBC , only -ltriSurface and -lPstream BUT I had ALSO to move /opt/OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/dummy/libPstrem.so to /opt/OpenFOAM-2.1.0/platforms/linux64GccDPOpt/lib/ (??? Why was it in a "dummy" folder ???) Now it's working! 'hope my post could help somebody else... Bernhard: updateded my controlDict . I works now. Once again, thanks a lot ! PS: do you think I should post a nethreaded, clean, in order to share my solution without all the rough exchanges with no interest?

June 20, 2012, 03:59		#15
Djub Senior Member Julien Join Date: Jun 2012 Location: France Posts: 152 Rep Power: 13	(Thanks everybody! I really appreciate your kind help !) OK, I apologize. I wanted to make it nice, so I made a special folder for the downloads, in order not to "mix" everything, but know I know I was totally wrong... Nevertheless, I did not understand from which cwd I should launch svn ?

June 20, 2012, 05:33		#17
Djub Senior Member Julien Join Date: Jun 2012 Location: France Posts: 152 Rep Power: 13	Know, swak4foam is in /home/me/OpenFOAM/me-2.1.0/run So, I made cd swak4Foam/ ./Alwmake There is still the errors.