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September 24, 2007, 11:20 |
Hello Forum,
I am trying to
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#1 |
Member
Alessandro Spadoni
Join Date: Mar 2009
Location: Atlanta, GA
Posts: 65
Rep Power: 17 |
Hello Forum,
I am trying to run a case in parallel. I can lamboot all the machines in my host file by issuing lamboot -v <file> and I get: [gtg627eOpenFOAM@ruzzene03 turbFoam]$ lamboot -v machineNetwork LAM 7.0.6/MPI 2 C++/ROMIO - Indiana University n-1<27397> ssi:boot:base:linear: booting n0 (ruzzene03) n-1<27397> ssi:boot:base:linear: booting n1 (ruzzene01) n-1<27397> ssi:boot:base:linear: booting n2 (ruzzene02) n-1<27397> ssi:boot:base:linear: booting n3 (ruzzene04) n-1<27397> ssi:boot:base:linear: booting n4 (ruzzene05) n-1<27397> ssi:boot:base:linear: booting n5 (ruzzene06) n-1<27397> ssi:boot:base:linear: finished ------------------------------------------------ Then I issue: mpirun --hostfile machineNetwork -np 12 turbFoam . AlexMovingMesh -parallel > log & and I get: [gtg627eOpenFOAM@ruzzene03 turbFoam]$ mpirun --hostfile machineNetwork -np 12 turbFoam . AlexMovingMesh -parallel > log & [1] 27507 [gtg627eOpenFOAM@ruzzene03 turbFoam]$ bash: orted: command not found bash: orted: command not found bash: orted: command not found bash: orted: command not found bash: orted: command not found [ruzzene03:27507] ERROR: A daemon on node ruzzene01 failed to start as expected. [ruzzene03:27507] ERROR: There may be more information available from [ruzzene03:27507] ERROR: the remote shell (see above). [ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127. [ruzzene03:27507] ERROR: A daemon on node ruzzene05 failed to start as expected. [ruzzene03:27507] ERROR: There may be more information available from [ruzzene03:27507] ERROR: the remote shell (see above). [ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127. [ruzzene03:27507] ERROR: A daemon on node ruzzene04 failed to start as expected. [ruzzene03:27507] ERROR: There may be more information available from [ruzzene03:27507] ERROR: the remote shell (see above). [ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127. [ruzzene03:27507] ERROR: A daemon on node ruzzene02 failed to start as expected. [ruzzene03:27507] ERROR: There may be more information available from [ruzzene03:27507] ERROR: the remote shell (see above). [ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127. [ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 275 [ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1164 [ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file errmgr_hnp.c at line 90 [ruzzene03:27507] ERROR: A daemon on node ruzzene06 failed to start as expected. [ruzzene03:27507] ERROR: There may be more information available from [ruzzene03:27507] ERROR: the remote shell (see above). [ruzzene03:27507] ERROR: The daemon exited unexpectedly with status 127. [ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 188 [ruzzene03:27507] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1196 -------------------------------------------------------------------------- mpirun was unable to cleanly terminate the daemons for this job. Returned value Timeout instead of ORTE_SUCCESS. -------------------------------------------------------------------------- Does anybody know what might cause this error? Is it possible that my bashrc file is not providing a correct path to OpenFOAM/OpenFOAM-1.4.1/src/openmpi-1.2.3/orte ? Thank you in advance, Alessandro Spadoni |
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