CFD Online Logo CFD Online URL
www.cfd-online.com
[Sponsors]
Home > Forums > Software User Forums > OpenFOAM

Problem with skew faces in simpleFoam...

Register Blogs Community New Posts Updated Threads Search

 
 
LinkBack Thread Tools Search this Thread Display Modes
Prev Previous Post   Next Post Next
Old   May 11, 2010, 06:41
Unhappy Problem with skew faces in simpleFoam...
  #1
New Member
 
Yasar
Join Date: Dec 2009
Location: Stuttgart
Posts: 9
Rep Power: 16
HelloWorld is on a distinguished road
Hello Foamers,

I'm running in a problem with simpleFoam here which is caused by highly skewed faces in my mesh after snappyHexMesh. But since this is my second model ever I'm simulating on I just can't figure out how to fix the problem.

so here's the detailed description of my problem:
I have an STL-model of a car which I'm meshing with snappyHexMesh. After meshing I've run the checkMesh-utility on it (see the result below). As shown in the checkMesh-report I have to deal with some highly skewed faces. Please note that I had a number about 190 highly skewed faces after my first run, so I increased the number of iterations in the snappyHexMeshDict for smoothing and solving to approx. 100, which actually took loads of time to mesh (about 9.5 hours only for meshing, is that normal?). As I said the result is shown below.

So I decided to give the simulation a try because the results after meshing for 2nd looked better than the results from the first time (Max skewness > 7 there). I first ran the potentialFoam solver on the case to calculate the potential flow (in parallel with writep-option) and started to run the simpleFoam-solver. It begins quite fine and the residuals also look good but after the it produces an error which I don't understand what it wants to tell me (see log-output below) and the simulation stops.

So, for now, I am a little confused on how to get that problem solved, because I don't really understand what's happening. Should I further increase the number of iterations in solving and smoothing in snappyHexMesh?

Any ideas on this issue would be greatly appreciated. Thanks in advance, regards
Yasar


checkMesh-report:
Quote:
Create time

Create polyMesh for time = 0

Time = 0

Mesh stats
points: 7789696
faces: 19507504
internal faces: 17853716
cells: 5889441
boundary patches: 6
point zones: 0
face zones: 0
cell zones: 0

Overall number of cells of each type:
hexahedra: 5181607
prisms: 0
wedges: 0
pyramids: 0
tet wedges: 0
tetrahedra: 0
polyhedra: 707834

Checking topology...
Boundary definition OK.
Point usage OK.
Upper triangular ordering OK.
Face vertices OK.
Number of regions: 1 (OK).

Checking patch topology for multiply connected surfaces ...
Patch Faces Points Surface topology
frontAndBack 32256 32786 ok (non-closed singly connected)
inlet 9216 9409 ok (non-closed singly connected)
outlet 9216 9409 ok (non-closed singly connected)
lowerWall 39202 40974 ok (non-closed singly connected)
upperWall 16128 16393 ok (non-closed singly connected)
body_ascii 1547770 1616044 multiply connected (shared edge)
<<Writing 6 conflicting points to set nonManifoldPoints

Checking geometry...
Overall domain bounding box (-7 -4 -2.19444e-05) (7 4 8)
Mesh (non-empty, non-wedge) directions (1 1 1)
Mesh (non-empty) directions (1 1 1)
Boundary openness (7.1503e-16 -1.75172e-15 -2.08081e-14) OK.
Max cell openness = 3.4668e-16 OK.
Max aspect ratio = 13.7502 OK.
Minumum face area = 1.17455e-08. Maximum face area = 0.00694556. Face area magnitudes OK.
Min volume = 1.09199e-11. Max volume = 0.000578843. Total volume = 895.944. Cell volumes OK.
Mesh non-orthogonality Max: 65.5369 average: 11.097
Non-orthogonality check OK.
Face pyramids OK.
***Max skewness = 5.00251, 28 highly skew faces detected which may impair the quality of the results
<<Writing 28 skew faces to set skewFaces

Failed 1 mesh checks.

End
simpleFoam-report:
Quote:
Time = 1

DILUPBiCG: Solving for Ux, Initial residual = 0.0470019, Final residual = 0.00159451, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.016735, Final residual = 0.000794285, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.00512888, Final residual = 0.000209387, No Iterations 1
GAMG: Solving for p, Initial residual = 0.533966, Final residual = 0.0521085, No Iterations 5
GAMG: Solving for p, Initial residual = 6.32435e-05, Final residual = 6.1552e-06, No Iterations 5
GAMG: Solving for p, Initial residual = 5.9373e-06, Final residual = 4.10853e-07, No Iterations 6
GAMG: Solving for p, Initial residual = 4.09881e-07, Final residual = 7.06244e-08, No Iterations 4
time step continuity errors : sum local = 0.000203317, global = -4.61929e-07, cumulative = -4.61929e-07
DILUPBiCG: Solving for omega, Initial residual = 0.00155999, Final residual = 0.000146049, No Iterations 1
DILUPBiCG: Solving for k, Initial residual = 1, Final residual = 0.0113172, No Iterations 2
ExecutionTime = 52.6 s ClockTime = 52 s

Time = 2

DILUPBiCG: Solving for Ux, Initial residual = 0.149428, Final residual = 0.0113072, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.117821, Final residual = 0.0093268, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.106949, Final residual = 0.0070286, No Iterations 1
GAMG: Solving for p, Initial residual = 0.00210953, Final residual = 0.00016236, No Iterations 3
GAMG: Solving for p, Initial residual = 0.000120218, Final residual = 7.7692e-06, No Iterations 6
GAMG: Solving for p, Initial residual = 7.5233e-06, Final residual = 5.19068e-07, No Iterations 6
GAMG: Solving for p, Initial residual = 5.18458e-07, Final residual = 8.13884e-08, No Iterations 4
time step continuity errors : sum local = 8.77645e-05, global = -1.32735e-06, cumulative = -1.78927e-06
DILUPBiCG: Solving for omega, Initial residual = 0.000656903, Final residual = 5.00807e-06, No Iterations 2
DILUPBiCG: Solving for k, Initial residual = 0.0293622, Final residual = 0.00282563, No Iterations 1
ExecutionTime = 91.23 s ClockTime = 91 s

Time = 3

DILUPBiCG: Solving for Ux, Initial residual = 0.203513, Final residual = 0.014925, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.138747, Final residual = 0.0110201, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.124262, Final residual = 0.00813135, No Iterations 1
GAMG: Solving for p, Initial residual = 0.0042347, Final residual = 0.000315632, No Iterations 3
GAMG: Solving for p, Initial residual = 0.027243, Final residual = 0.00228496, No Iterations 6
GAMG: Solving for p, Initial residual = 0.000232067, Final residual = 1.93698e-05, No Iterations 11
GAMG: Solving for p, Initial residual = 1.77123e-05, Final residual = 1.68434e-06, No Iterations 10
time step continuity errors : sum local = 0.000132953, global = 1.22741e-06, cumulative = -5.61861e-07
DILUPBiCG: Solving for omega, Initial residual = 0.000526977, Final residual = 5.19195e-05, No Iterations 1
DILUPBiCG: Solving for k, Initial residual = 0.0175695, Final residual = 0.0016615, No Iterations 1
ExecutionTime = 140.46 s ClockTime = 140 s

Time = 4

DILUPBiCG: Solving for Ux, Initial residual = 0.142828, Final residual = 0.0099319, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.0910163, Final residual = 0.00705615, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.0430176, Final residual = 0.00261685, No Iterations 1
GAMG: Solving for p, Initial residual = 0.00562449, Final residual = 0.000403218, No Iterations 4
GAMG: Solving for p, Initial residual = 0.000298234, Final residual = 2.85729e-05, No Iterations 5
GAMG: Solving for p, Initial residual = 2.58226e-05, Final residual = 1.77719e-06, No Iterations 6
GAMG: Solving for p, Initial residual = 1.7678e-06, Final residual = 1.27912e-07, No Iterations 6
time step continuity errors : sum local = 0.000100083, global = 1.29687e-06, cumulative = 7.35013e-07
DILUPBiCG: Solving for omega, Initial residual = 0.000384138, Final residual = 3.59847e-05, No Iterations 1
DILUPBiCG: Solving for k, Initial residual = 0.0116713, Final residual = 0.00105877, No Iterations 1
ExecutionTime = 175.52 s ClockTime = 175 s

Time = 5

DILUPBiCG: Solving for Ux, Initial residual = 0.0567542, Final residual = 0.00230703, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.0345311, Final residual = 0.00163081, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.0136472, Final residual = 0.000531466, No Iterations 1
GAMG: Solving for p, Initial residual = 0.015898, Final residual = 0.00142227, No Iterations 4
GAMG: Solving for p, Initial residual = 0.000205296, Final residual = 1.99854e-05, No Iterations 5
GAMG: Solving for p, Initial residual = 1.86487e-05, Final residual = 1.28029e-06, No Iterations 6
GAMG: Solving for p, Initial residual = 1.27547e-06, Final residual = 9.04708e-08, No Iterations 6
time step continuity errors : sum local = 8.73983e-05, global = 1.17262e-06, cumulative = 1.90763e-06
DILUPBiCG: Solving for omega, Initial residual = 0.000272353, Final residual = 2.48687e-05, No Iterations 1
DILUPBiCG: Solving for k, Initial residual = 0.00704169, Final residual = 0.000685767, No Iterations 1
ExecutionTime = 211.96 s ClockTime = 212 s

Time = 6

DILUPBiCG: Solving for Ux, Initial residual = 0.0505934, Final residual = 0.00345681, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.0418622, Final residual = 0.00363079, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.0108325, Final residual = 0.000825592, No Iterations 1
GAMG: Solving for p, Initial residual = 0.00819174, Final residual = 0.000724051, No Iterations 3
GAMG: Solving for p, Initial residual = 0.000227248, Final residual = 2.16144e-05, No Iterations 5
GAMG: Solving for p, Initial residual = 1.99455e-05, Final residual = 1.36262e-06, No Iterations 6
GAMG: Solving for p, Initial residual = 1.35665e-06, Final residual = 9.11873e-08, No Iterations 6
time step continuity errors : sum local = 6.61502e-05, global = 1.37282e-07, cumulative = 2.04491e-06
DILUPBiCG: Solving for omega, Initial residual = 0.000209738, Final residual = 1.9301e-05, No Iterations 1
DILUPBiCG: Solving for k, Initial residual = 0.00470266, Final residual = 0.000436278, No Iterations 1
ExecutionTime = 245.04 s ClockTime = 245 s

Time = 7

DILUPBiCG: Solving for Ux, Initial residual = 0.0991008, Final residual = 0.00667086, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.0711584, Final residual = 0.00591094, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.0278779, Final residual = 0.00193497, No Iterations 1
GAMG: Solving for p, Initial residual = 0.00632294, Final residual = 0.000219981, No Iterations 2
GAMG: Solving for p, Initial residual = 0.000284016, Final residual = 1.93529e-05, No Iterations 4
GAMG: Solving for p, Initial residual = 2.19301e-05, Final residual = 1.57307e-06, No Iterations 5
GAMG: Solving for p, Initial residual = 1.58729e-06, Final residual = 1.40923e-07, No Iterations 5
time step continuity errors : sum local = 3.20926e-05, global = 6.85727e-08, cumulative = 2.11349e-06
DILUPBiCG: Solving for omega, Initial residual = 0.000179259, Final residual = 1.5832e-05, No Iterations 1
DILUPBiCG: Solving for k, Initial residual = 0.00366453, Final residual = 0.000314028, No Iterations 1
ExecutionTime = 275.36 s ClockTime = 275 s

Time = 8

DILUPBiCG: Solving for Ux, Initial residual = 0.0998382, Final residual = 0.00637505, No Iterations 1
DILUPBiCG: Solving for Uy, Initial residual = 0.0676365, Final residual = 0.00532405, No Iterations 1
DILUPBiCG: Solving for Uz, Initial residual = 0.0387657, Final residual = 0.00257048, No Iterations 1
GAMG: Solving for p, Initial residual = 0.00684188, Final residual = 0.000443793, No Iterations 3
GAMG: Solving for p, Initial residual = 0.00117625, Final residual = 0.000106433, No Iterations 5
GAMG: Solving for p, Initial residual = 7.42813e-05, Final residual = 4.99522e-06, No Iterations 6
GAMG: Solving for p, Initial residual = 4.91373e-06, Final residual = 3.37231e-07, No Iterations 6
time step continuity errors : sum local = 5.60022e-05, global = -3.23231e-08, cumulative = 2.08116e-06
DILUPBiCG: Solving for omega, Initial residual = 0.000156607, Final residual = 1.42548e-05, No Iterations 1
DILUPBiCG: Solving for k, Initial residual = 0.00290969, Final residual = 0.000245979, No Iterations 1
ExecutionTime = 309.96 s ClockTime = 310 s

Time = 9

[10] #0 Foam::error::printStack(Foam::Ostream&) in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libOpenFOAM.so"
[10] #1 Foam::sigFpe::sigFpeHandler(int) in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libOpenFOAM.so"
[10] #2 ?? in "/lib64/libc.so.6"
[10] #3 Foam::LimitedScheme<Foam::Vector<double>, Foam::GammaLimiter<Foam::NVDVTVDV>, Foam::limitFuncs::null>::limiter(Foam::GeometricFi eld<F
oam::Vector<double>, Foam::fvPatchField, Foam::volMesh> const&) const in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libfiniteVolume.so"
[10] #4 Foam::limitedSurfaceInterpolationScheme<Foam::Vect or<double> >::weights(Foam::GeometricField<Foam::Vector<doubl e>, Foam::fvPatchField, Foam::volMesh> const&) const in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libfiniteVolume.so"
[10] #5 Foam::fv::gaussConvectionScheme<Foam::Vector<doubl e> >::fvmDiv(Foam::GeometricField<double, Foam::fvsPatchField, Foam::surfaceMesh> c
onst&, Foam::GeometricField<Foam::Vector<double>, Foam::fvPatchField, Foam::volMesh>&) const in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libfiniteVolume.so"
[10] #6 Foam::tmp<Foam::fvMatrix<Foam::Vector<double> > > Foam::fvm::div<Foam::Vector<double> >(Foam::GeometricField<double, Foam::fvsPatchFi
eld, Foam::surfaceMesh> const&, Foam::GeometricField<Foam::Vector<double>, Foam::fvPatchField, Foam::volMesh>&, Foam::word const&) in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/applications/bin/linux64GccDPOpt/simpleFoam"
[10] #7 Foam::tmp<Foam::fvMatrix<Foam::Vector<double> > > Foam::fvm::div<Foam::Vector<double> >(Foam::GeometricField<double, Foam::fvsPatchFi
eld, Foam::surfaceMesh> const&, Foam::GeometricField<Foam::Vector<double>, Foam::fvPatchField, Foam::volMesh>&) in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/applications/bin/linux64GccDPOpt/simpleFoam"
[10] #8 main in "/opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/applications/bin/linux64GccDPOpt/simpleFoam"
[10] #9 __libc_start_main in "/lib64/libc.so.6"
[10] #10 _start at /usr/src/packages/BUILD/glibc-2.9/csu/../sysdeps/x86_64/elf/start.S:116
[ivk190:22464] *** Process received signal ***
[ivk190:22464] Signal: Floating point exception (8)
[ivk190:22464] Signal code: (-6)
[ivk190:22464] Failing at address: 0x7e3000057c0
[ivk190:22464] [ 0] /lib64/libc.so.6 [0x7f96109db6e0]
[ivk190:22464] [ 1] /lib64/libc.so.6(gsignal+0x35) [0x7f96109db645]
[ivk190:22464] [ 2] /lib64/libc.so.6 [0x7f96109db6e0]
[ivk190:22464] [ 3] /opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libfiniteVolume.so(_ZNK4Foam13LimitedSchemeINS_6Ve ctorIdEENS_12GammaLimiterINS_8NVDVTVDVEEENS_10limi tFuncs4nullEE7limiterERKNS_14GeometricFieldIS2_NS_ 12fvPatchFieldENS_7volMeshEEE+0x446) [0x7f9612377eb6]
[ivk190:22464] [ 4] /opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libfiniteVolume.so(_ZNK4Foam33limitedSurfaceInterp olationSchemeINS_6VectorIdEEE7weightsERKNS_14Geome tricFieldIS2_NS_12fvPatchFieldENS_7volMeshEEE+0x2a ) [0x7f961235ad7a]
[ivk190:22464] [ 5] /opt1/OpenFOAM/SUSE11.1/OpenFOAM-1.6.x/lib/linux64GccDPOpt/libfiniteVolume.so(_ZNK4Foam2fv21gaussConvectionSc hemeINS_6VectorIdEEE6fvmDivERKNS_14GeometricFieldI dNS_13fvsPatchFieldENS_11surfaceMeshEEERNS5_IS3_NS _12fvPatchFieldENS_7volMeshEEE+0x59) [0x7f96126382c9]
[ivk190:22464] [ 6] simpleFoam [0x440b51]
[ivk190:22464] [ 7] simpleFoam [0x440d7c]
[ivk190:22464] [ 8] simpleFoam [0x41546f]
[ivk190:22464] [ 9] /lib64/libc.so.6(__libc_start_main+0xe6) [0x7f96109c7586]
[ivk190:22464] [10] simpleFoam [0x414899]
[ivk190:22464] *** End of error message ***
[ivk189][[63242,1],6][btl_tcp_frag.c:216:mca_btl_tcp_frag_recv] mca_btl_tcp_frag_recv: readv failed: Connection reset by peer (104)
[ivk191][[63242,1],14][btl_tcp_frag.c:216:mca_btl_tcp_frag_recv] mca_btl_tcp_frag_recv: readv failed: Connection reset by peer (104)
--------------------------------------------------------------------------
mpirun noticed that process rank 10 with PID 22464 on node 129.69.127.90 exited on signal 8 (Floating point exception).
--------------------------------------------------------------------------
HelloWorld is offline   Reply With Quote

 


Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are On
Refbacks are On


Similar Threads
Thread Thread Starter Forum Replies Last Post
Smooth Grid Error! Help seasoul FLUENT 1 March 24, 2008 10:56
Severe nonorthogonality and severe skewness problem qtian OpenFOAM Running, Solving & CFD 2 January 22, 2008 18:47
Wmake clock skew detectedis this causing a problem york OpenFOAM Running, Solving & CFD 2 July 10, 2007 23:43
"Memory too low" problem with Fluent HELP NEEDED Amr FLUENT 6 May 8, 2006 12:06
Error to re-open fluent case file J.Gimbun FLUENT 0 April 27, 2006 08:42


All times are GMT -4. The time now is 11:57.