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March 28, 2007, 07:33 |
The topmost error is:
#######
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#1 |
New Member
Alexander Grahn
Join Date: Mar 2009
Posts: 12
Rep Power: 17 |
The topmost error is:
##################### meshes/polyMesh/polyPatches/derivedPolyPatches/cyclicPolyPatch/cyclicPolyPatch.d ep:248: warning: overriding commands for target `Make/linuxGcc4DPOpt/cyclicPolyPatcSOURCE=global/global.C ; g++ -m32 -Dlinux -DDP -Wall -W -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-30 -DWM_PROJECT_VERSION='"'1. 3'"' -I/home/grahn/OpenFOAM/OpenFOAM-1.3/src/zlib-1.2.1 -I/home/grahn/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude -IlnInclude -I. -fPIC -pthread -c $SOURCE -o Make/linuxGcc4DPOpt/global.o In file included from global/global.C:61: /home/grahn/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude/error.C:41:22: error: demangle.h: No such file or directory /home/grahn/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude/error.C: In static member function 'static void Foam::error::printStack(Foam:stream&)': /home/grahn/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude/error.C:193: error: 'auto_demangling' was not declared in this scope /home/grahn/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude/error.C:194: error: 'cplus_demangle' was not declared in this scope make: *** [Make/linuxGcc4DPOpt/global.o] Error 1 Last error is: ############## SOURCE=foamInfoExec.C ; g++ -m32 -Dlinux -DDP -Wall -W -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-30 -I/home/grahn/OpenFOAM/Ope nFOAM-1.3/src/OpenFOAM/lnInclude -IlnInclude -I. -fPIC -pthread -c $SOURCE -o Make/linuxGcc4DPOpt/foamInfoExec.o /home/grahn/OpenFOAM/OpenFOAM-1.3/wmake/bashScripts/mkObjectDir /home/grahn/OpenFOAM/OpenFOAM-1.3/applications/bin/linuxGcc4DPOpt/foamInfoExec g++ -m32 -Dlinux -DDP -Wall -W -Wno-unused-parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-30 -I/home/grahn/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/ln Include -IlnInclude -I. -fPIC -pthread Make/linuxGcc4DPOpt/foamInfoExec.o -L/home/grahn/OpenFOAM/OpenFOAM-1.3/lib/linuxGcc4DPOpt \ -lOpenFOAM -liberty -o /home/grahn/OpenFOAM/OpenFOAM-1.3/applications/bin/linuxGcc4DPOpt/foamInfoExec /usr/lib/gcc/i686-pc-linux-gnu/4.1.1/../../../../i686-pc-linux-gnu/bin/ld: cannot find -lOpenFOAM collect2: ld returned 1 exit status make: *** [/home/grahn/OpenFOAM/OpenFOAM-1.3/applications/bin/linuxGcc4DPOpt/foamInfoExec] Error 1 This is the output of 'gcc -v': ############################### Using built-in specs. Target: i686-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-4.1.1-r3/work/gcc-4.1.1/configure --prefix=/usr --bindir=/usr/i686-pc-linux-gnu/gcc-bin/4.1.1 --includedir=/usr/lib/gcc/i686-pc-linux-gnu/4.1.1/include --datadir=/usr/share/gcc-data/i686-pc-linux-gnu/4.1.1 --mandir=/usr/share/gcc-data/i686-pc-linux-gnu/4.1.1/man --infodir=/usr/share/gcc-data/i686-pc-linux-gnu/4.1.1/info --with-gxx-include-dir=/usr/lib/gcc/i686-pc-linux-gnu/4.1.1/include/g++-v4 --host=i686-pc-linux-gnu --build=i686-pc-linux-gnu --disable-altivec --enable-nls --without-included-gettext --with-system-zlib --disable-checking --disable-werror --enable-secureplt --disable-libunwind-exceptions --disable-multilib --disable-libmudflap --disable-libssp --enable-languages=c,c++,java,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu Thread model: posix gcc version 4.1.1 (Gentoo 4.1.1-r3) And this is 'uname -a' output: ############################## Linux fwss41 2.6.19-gentoo-r5 #1 SMP Mon Mar 12 11:46:45 CET 2007 i686 Intel(R) Core(TM)2 CPU 6600 @ 2.40GHz GenuineIntel GNU/Linux |
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March 28, 2007, 07:38 |
Try again after installing dem
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#2 |
Senior Member
Join Date: Mar 2009
Posts: 854
Rep Power: 22 |
Try again after installing demangle.h which is required to compile OpenFOAM.
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March 28, 2007, 08:08 |
Henry,
Is demangle.h the on
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#3 |
New Member
Alexander Grahn
Join Date: Mar 2009
Posts: 12
Rep Power: 17 |
Henry,
Is demangle.h the one that comes with libcwd http://libcwd.sourceforge.net/index.html ? Alexander |
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March 28, 2007, 08:14 |
We use SuSE and demangle.h ins
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#4 |
Senior Member
Join Date: Mar 2009
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We use SuSE and demangle.h installs automatically when the code development package is installed. I do not have any experience with Gentoo.
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March 28, 2007, 08:42 |
emerge binutils
should solve
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#5 |
Member
rafal zietara
Join Date: Mar 2009
Location: Manchester, UK
Posts: 60
Rep Power: 17 |
emerge binutils
should solve the problem rafal |
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March 28, 2007, 08:48 |
Thanks, Rafal, but binutils (2
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#6 |
New Member
Alexander Grahn
Join Date: Mar 2009
Posts: 12
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Thanks, Rafal, but binutils (2.16.1-r3) is already installed.
Alexander |
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March 28, 2007, 09:13 |
Rafal, would you please try to
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#7 |
New Member
Alexander Grahn
Join Date: Mar 2009
Posts: 12
Rep Power: 17 |
Rafal, would you please try to find out to which package demangle.h belongs. This could be done with
equery belongs `locate -r '\<demangle.h\>'` 'equery' is part of the genoolkit package. Of course, package 'slocate' must be installed and the file name data base (updated automatically once a day by updatedb, started via crond) must be present. Thanks, Alexander |
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March 28, 2007, 09:28 |
demangle.h is a part of the sy
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#8 |
Member
rafal zietara
Join Date: Mar 2009
Location: Manchester, UK
Posts: 60
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demangle.h is a part of the sys-devel/binutils.
I untar it and in /include there is demangle.h rafal |
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March 28, 2007, 09:40 |
I assume (didnt test) that unt
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#9 |
Member
rafal zietara
Join Date: Mar 2009
Location: Manchester, UK
Posts: 60
Rep Power: 17 |
I assume (didnt test) that untaring binutils and
putting demangle.h to /usr/include will solve the problem(possibly) changing permissions of the file. maybe you will need to copy in some other dependencies of demangle. binutils 2.16.1-r3 latest stable-should be the most appropriate. hope this helps. rafal PS I dont remember how i did my OF working on Gentoo but it was definitely gentoo way of doing things |
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March 28, 2007, 09:50 |
demangle.h is indeed part of t
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#10 |
New Member
Alexander Grahn
Join Date: Mar 2009
Posts: 12
Rep Power: 17 |
demangle.h is indeed part of the binutils source file, but doesn't get installed when installing binutils.
I wish I could simply say emerge openfoam but grahn@fwss41:~ $ emerge --search openfoam Searching... [ Results for search key : openfoam ] [ Applications found : 0 ] :---( |
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April 26, 2007, 05:59 |
About missing demangle.h : att
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#11 |
Senior Member
Mattijs Janssens
Join Date: Mar 2009
Posts: 1,419
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About missing demangle.h : attached a version of error.C (OpenFOAM/db/error/error.C) which does not use demangle.h but uses the cxxabi.h (which is present in most/all gcc installations).
error.C Tested it on one machine and seems to compile and function ok. Please let me know if there are any problems with it. |
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May 8, 2007, 08:37 |
Hi Mattijs,
I replaced the
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#12 |
Senior Member
Frank Bos
Join Date: Mar 2009
Location: The Netherlands
Posts: 340
Rep Power: 18 |
Hi Mattijs,
I replaced the error.C in my OpenFOAM 1.3 installation with your latest version. The following errors occur: /home/frankl/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude/error.C:97: error: definition of implicitly-declared 'Foam::error::~error()' /home/frankl/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude/error.C: In static member function 'static void Foam::error::printStack(Foam:stream&)': /home/frankl/OpenFOAM/OpenFOAM-1.3/src/OpenFOAM/lnInclude/error.C:327: error: 'class Foam::IFstream' has no member named 'getLine' make: *** [Make/linuxGcc4DPOpt/global.o] Error 1 make: *** Waiting for unfinished jobs.... Any ideas? Regards, Frank
__________________
Frank Bos |
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May 8, 2007, 09:23 |
The error.C file Mattijs poste
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#13 |
Senior Member
Join Date: Mar 2009
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The error.C file Mattijs posted is for OpenFOAM-1.4.
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June 20, 2007, 05:03 |
Thanks, Mattijs, for providing
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#14 |
New Member
Alexander Grahn
Join Date: Mar 2009
Posts: 12
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Thanks, Mattijs, for providing `error.C' which resolves the demangle.h-missing-error.
Next, I had to install the termcap library. Almost no recent software links against it. Hasn't termcap been superseeded by terminfo for ages now? Now, compilation fails due to a syntax error in file `gambitToFoam.C'. (The recently posted cumulative patch to OpenFOAM-1.4 has been applied.) Any ideas? Thanks for your help. Alexander make[3]: Entering directory `/home/grahn/OpenFOAM/OpenFOAM-1.4/applications/utilities/mesh/conversion/gambit ToFoam' SOURCE=gambitToFoam.L ; flex++ -f $SOURCE ; mv lex.yy.cc Make/linuxGcc4DPOpt/gambitToFoam.C ; g++ -m32 -Dlinux -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused- parameter -Wold-style-cast -O3 -DNoRepository -ftemplate-depth-40 -IlnInclude -I. -I/home/grahn/OpenFOAM/OpenFOAM-1.4/src/OpenFOAM/lnInclude -fPIC -pthread -c Make/linuxGcc4DPOpt/gambitToFoam.C -o Make/linuxGcc4DPOpt/gambitToFoam.o /usr/bin/m4:stdin:15917: Warning: excess arguments to builtin `m4_ifdef' ignored lex.yy.cc: In member function 'virtual int yyFlexLexer::yylex()': lex.yy.cc:14036: warning: use of old-style cast lex.yy.cc:14036: warning: use of old-style cast lex.yy.cc:14052: warning: use of old-style cast lex.yy.cc:14612: warning: use of old-style cast lex.yy.cc: In member function 'int yyFlexLexer::yy_get_next_buffer()': lex.yy.cc:14860: warning: use of old-style cast lex.yy.cc:14883: warning: use of old-style cast lex.yy.cc:14896: warning: use of old-style cast lex.yy.cc:14896: warning: use of old-style cast lex.yy.cc:14917: warning: use of old-style cast lex.yy.cc: In member function 'yy_state_type yyFlexLexer::yy_get_previous_state()': lex.yy.cc:14965: warning: use of old-style cast lex.yy.cc:14965: warning: use of old-style cast lex.yy.cc: In member function 'void yyFlexLexer::yyunput(int, char*)': lex.yy.cc:15025: warning: use of old-style cast lex.yy.cc:15026: warning: use of old-style cast lex.yy.cc:15034: warning: use of old-style cast lex.yy.cc: In member function 'int yyFlexLexer::yyinput()': lex.yy.cc:15101: warning: use of old-style cast lex.yy.cc: In member function 'virtual yy_buffer_state* yyFlexLexer::yy_create_buffer(std::istream*, int)': lex.yy.cc:15181: warning: use of old-style cast lex.yy.cc:15190: warning: use of old-style cast lex.yy.cc: In member function 'virtual void yyFlexLexer::yy_delete_buffer(yy_buffer_state*)': lex.yy.cc:15212: warning: use of old-style cast lex.yy.cc:15215: warning: use of old-style cast lex.yy.cc:15217: warning: use of old-style cast lex.yy.cc: In member function 'void yyFlexLexer::yyensure_buffer_stack()': lex.yy.cc:15344: warning: use of old-style cast lex.yy.cc:15362: warning: use of old-style cast lex.yy.cc: In member function 'void yyFlexLexer::yy_push_state(int)': lex.yy.cc:15380: warning: use of old-style cast lex.yy.cc:15383: warning: use of old-style cast lex.yy.cc:15383: warning: use of old-style cast lex.yy.cc: In function 'void* yyalloc(yy_size_t)': lex.yy.cc:15463: warning: use of old-style cast lex.yy.cc: In function 'void* yyrealloc(void*, yy_size_t)': lex.yy.cc:15475: warning: use of old-style cast lex.yy.cc:15475: warning: use of old-style cast lex.yy.cc: In function 'void yyfree(void*)': lex.yy.cc:15480: warning: use of old-style cast gambitToFoam.L: In function 'int main(int, char**)': gambitToFoam.L:685: error: expected `]' before ';' token gambitToFoam.L:685: error: expected `]' before ';' token gambitToFoam.L:777: error: expected `}' at end of input gambitToFoam.L:777: error: expected `}' at end of input gambitToFoam.L:777: error: expected ',' or ';' at end of input gambitToFoam.L:775: warning: unused variable 'faceIndex' gambitToFoam.L:777: error: expected `}' at end of input make[3]: *** [Make/linuxGcc4DPOpt/gambitToFoam.o] Error 1 make[3]: Leaving directory `/home/grahn/OpenFOAM/OpenFOAM-1.4/applications/utilities/mesh/conversion/gambit ToFoam' make[2]: *** [gambitToFoam] Error 2 make[2]: Leaving directory `/home/grahn/OpenFOAM/OpenFOAM-1.4/applications/utilities/mesh/conversion' make[1]: *** [conversion] Error 2 make[1]: Leaving directory `/home/grahn/OpenFOAM/OpenFOAM-1.4/applications/utilities/mesh' make: *** [mesh] Error 2 This is the output from `gcc -v': ################################ Using built-in specs. Target: i686-pc-linux-gnu Configured with: /var/tmp/portage/sys-devel/gcc-4.1.2/work/gcc-4.1.2/configure --prefix=/usr --bindir=/usr/i686-pc-linux-gnu/gcc-bin/4.1.2 --includedir=/usr/lib/gcc/i686-pc-linux-gnu/4.1.2/include --datadir=/usr/share/gcc-data/i686-pc-linux-gnu/4.1.2 --mandir=/usr/share/gcc-data/i686-pc-linux-gnu/4.1.2/man --infodir=/usr/share/gcc-data/i686-pc-linux-gnu/4.1.2/info --with-gxx-include-dir=/usr/lib/gcc/i686-pc-linux-gnu/4.1.2/include/g++-v4 --host=i686-pc-linux-gnu --build=i686-pc-linux-gnu --disable-altivec --enable-nls --without-included-gettext --with-system-zlib --disable-checking --disable-werror --enable-secureplt --disable-libunwind-exceptions --disable-multilib --enable-libmudflap --disable-libssp --enable-languages=c,c++,java,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu Thread model: posix gcc version 4.1.2 (Gentoo 4.1.2) |
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June 20, 2007, 09:48 |
Looks like flex generated code
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#15 |
Assistant Moderator
Bernhard Gschaider
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Looks like flex generated code that gcc doesn't understand. What does
flex++ -V say?
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June 20, 2007, 10:03 |
It is actually flex that I am
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#16 |
New Member
Alexander Grahn
Join Date: Mar 2009
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It is actually flex that I am using.
grahn@localhost:~$ flex -V flex 2.5.33 This is what I found in the flex info manual: You can also use `flex' to generate a C++ scanner class, using the `-+' option (or, equivalently, `%option c++)', which is automatically specified if the name of the `flex' executable ends in a '+', such as `flex++'. When using this option, `flex' defaults to generating the scanner to the file `lex.yy.cc' instead of `lex.yy.c'. The generated scanner includes the header file `FlexLexer.h', which defines the interface to two C++ classes. As Allwmake complained about missing flex++, I simply created a hardlink `flex++' pointing to `flex'. |
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June 20, 2007, 11:09 |
Your encountering what I encou
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#17 |
Guest
Posts: n/a
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Your encountering what I encountered. Some versions of flex don't like "]]". You need to edit the corresponding .L file and put a space in between the to square closing brackets making it "] ]". You will probably need to do this to a few .L files to get through the compilation.
I also see your using Gentoo (cool) See my thread here http://www.cfd-online.com/OpenFOAM_D...tml?1181852126 |
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June 20, 2007, 11:26 |
Thanks, Conn, very much. Now O
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#18 |
New Member
Alexander Grahn
Join Date: Mar 2009
Posts: 12
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Thanks, Conn, very much. Now OpenFOAM compiles till the end.
But the next problem occurs when I try to run the examples from the `Getting Started' section of the README: grahn@localhost:~/OpenFOAM/grahn-1.4/run/tutorials/icoFoam $ blockMesh . cavity blockMesh: error while loading shared libraries: /usr/lib/libz.so: invalid ELF header |
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June 21, 2007, 02:23 |
I offer merge this thread & th
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#19 |
Member
Ruben I. Mukhamadeev
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Location: Obninsk, Kaluga reg., Russian Federation
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I offer merge this thread & thread "Cumulative patch for OF-1.4" due to discussion of the same problems with code recompilation
Regards |
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August 31, 2007, 03:31 |
FYI:
I am compiling OF 1.4.
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#20 |
Senior Member
Srinath Madhavan (a.k.a pUl|)
Join Date: Mar 2009
Location: Edmonton, AB, Canada
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FYI:
I am compiling OF 1.4.1 on x86_64 as I type. I have found that using the error.C posted above results in the following compilation error: SOURCE=graph/writers/jplotGraph/jplotGraph.C ; g++ -m64 -Dlinux64 -DDP -Wall -Wno-strict-aliasing -Wextra -Wno-unused-parameter -Wold-style-cast -march=opteron -O3 -DNoRepository -ftemplate-depth-40 -DWM_PROJECT_VERSION='"'1.4.1'"' -I/home/madhavan/OpenFOAM/OpenFOAM-1.4.1/src/zlib-1.2.1 -IlnInclude -I. -I/home/madhavan/OpenFOAM/OpenFOAM-1.4.1/src/OpenFOAM/lnInclude -fPIC -c $SOURCE -o Make/linux64GccDPOpt/jplotGraph.o global.o: In function `Foam::getSymbolForRaw(Foam:stream&, Foam::string const&, Foam::fileName const&, Foam::word const&)': global.C.text+0x16b0): multiple definition of `Foam::getSymbolForRaw(Foam:stream&, Foam::string const&, Foam::fileName const&, Foam::word const&)' printStack.o:printStack.C.text+0x2c0): first defined here /usr/bin/ld: Warning: size of symbol `Foam::getSymbolForRaw(Foam:stream&, Foam::string const&, Foam::fileName const&, Foam::word const&)' changed from 1344 in printStack.o to 913 in global.o global.o: In function `Foam::printSourceFileAndLine(Foam:stream&, Foam::HashTable<int,> const&, Foam::fileName const&, Foam::word const&)': global.C.text+0x2560): multiple definition of `Foam::printSourceFileAndLine(Foam:stream&, Foam::HashTable<int,> const&, Foam::fileName const&, Foam::word const&)' printStack.o:printStack.C.text+0x800): first defined here /usr/bin/ld: Warning: size of symbol `Foam::printSourceFileAndLine(Foam:stream&, Foam::HashTable<int,> const&, Foam::fileName const&, Foam::word const&)' changed from 3093 in printStack.o to 3361 in global.o global.o: In function `Foam::error::printStack(Foam:stream&)': global.C.text+0x3290): multiple definition of `Foam::error::printStack(Foam:stream&)' printStack.o:printStack.C.text+0x1420): first defined here /usr/bin/ld: Warning: size of symbol `Foam::error::printStack(Foam:stream&)' changed from 5959 in printStack.o to 5643 in global.o collect2: ld returned 1 exit status If I use the stock error.C the compilation proceeds without any problems. NB: I built binutils and gcc from scratch, so obviously I am not missing demangle.H |
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