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January 11, 2018, 11:00 |
Errors compiling OpenFOAM-5.0
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#1 |
New Member
Join Date: Jan 2018
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Dear Foamers,
Trying to install OpenFOAM-5.0 on linux CentOS 64 bits, with gcc-6.2.0 and mpich-3.2.1 (user installed), I succeeded with scotch and paraview, with a lot of OpenFOAM tools, but I got the following error messages that I can't solve. Can someone help me ? Thank you I'm giving only the main messages among a lot : ... Allwmake /cea/dsku/u-pong/hal3/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/applications/solvers/compressible/rhoCentralFoam wmake BCs wmake dsmcFoam wmake mdEquilibrationFoam wmake rhoPimpleDyMFoam wmake rhoPorousSimpleFoam wmake sonicDyMFoam wmake laminarFlameSpeed wmake rhoReactingBuoyantFoam wmake adjointOutletPressure wmake tractionDisplacement wmake cavitatingDyMFoam wmake adjointOutletVelocity wmake SCOPE wmake PDRModels wmake dragModels wmake basic wmake PDRDragModel wmake turbulence wmake PDRkEpsilon wmake XiEqModels wmake basicXiSubXiEq wmake XiGModels wmake basicXiSubG wmake XiModels wmake algebraic wmake fixed wmake transport wmake XiEqModels wmake Gulder wmake instabilityXiEq wmake SCOPEBlendXiEq wmake SCOPEXiEq wmake XiEqModel wmake XiGModels wmake instabilityG wmake KTS wmake XiGModel ... mpicc -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -I.. -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/finiteVolume/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/transportModels/twoPhaseMixture/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/transportModels -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/transportModels/incompressible/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/transportModels/interfaceProperties/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/TurbulenceModels/turbulenceModels/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/TurbulenceModels/incompressible/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/thermophysicalModels/barotropicCompressibilityModel/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/dynamicMesh/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/meshTools/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/dynamicFvMesh/lnInclude -IlnInclude -I. -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/OpenFOAM/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/OSspecific/POSIX/lnInclude -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/cavitatingDyMFoam.o -L/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/platforms/linux64GccDPInt32Opt/lib \ -lturbulenceModels -lincompressibleTurbulenceModels -lbarotropicCompressibilityModel -lfiniteVolume -lfvOptions -ldynamicMesh -ldynamicFvMesh -lmeshTools -lOpenFOAM -ldl -lpthread \ -lm -o /cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/platforms/linux64GccDPInt32Opt/bin/cavitatingDyMFoam mpicc -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/TurbulenceModels/turbulenceModels/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/TurbulenceModels/incompressible/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/TurbulenceModels/compressible/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/transportModels -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/transportModels/incompressible/singlePhaseTransportModel -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/finiteVolume/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/meshTools/lnInclude -IlnInclude -I. -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/OpenFOAM/lnInclude -I/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/src/OSspecific/POSIX/lnInclude -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/adjointOutletPressure/adjointOutletPressureFvPatchScalarField.o Make/linux64GccDPInt32Opt/adjointOutletVelocity/adjointOutletVelocityFvPatchVectorField.o Make/linux64GccDPInt32Opt/adjointShapeOptimizationFoam.o -L/cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/platforms/linux64GccDPInt32Opt/lib \ -lturbulenceModels -lincompressibleTurbulenceModels -lincompressibleTransportModels -lfiniteVolume -lmeshTools -lfvOptions -lOpenFOAM -ldl -lpthread \ -lm -o /cea/home/b5/renardf/OpenFOAM/OpenFOAM-5.0/platforms/linux64GccDPInt32Opt/bin/adjointShapeOptimizationFoam Make/linux64GccDPInt32Opt/electrostaticFoam.o: In function `_ZNK4Foam3tmpINS_5FieldIdEEE5clearEv.part.101': electrostaticFoam.C:(.text+0x1e): undefined reference to `operator delete[](void*)' electrostaticFoam.C:(.text+0x26): undefined reference to `operator delete(void*)' Make/linux64GccDPInt32Opt/electrostaticFoam.o: In function `_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESa IcEE12_M_constructIPcEEvT_S7_St20forward_iterator_ tag.isra.182': electrostaticFoam.C:(.text+0x80): undefined reference to `std::__throw_logic_error(char const*)' electrostaticFoam.C:(.text+0xcb): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)' Make/linux64GccDPInt32Opt/electrostaticFoam.o: In function `_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basi c_stringIT_T0_T1_EEPKS5_OS8_.constprop.331': electrostaticFoam.C:(.text+0x429): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' Make/linux64GccDPInt32Opt/electrostaticFoam.o: In function `_ZNK4Foam3tmpINS_12fvPatchFieldIdEEE5clearEv.part .78': electrostaticFoam.C:(.text+0x4d0): undefined reference to `operator delete(void*)' electrostaticFoam.C:(.text+0x4de): undefined reference to `operator delete[](void*)' electrostaticFoam.C:(.text+0x4e6): undefined reference to `operator delete(void*)' |
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January 12, 2018, 09:35 |
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#2 |
New Member
Join Date: Jan 2018
Posts: 2
Rep Power: 0 |
I solved the problem by modifying the wmake/rules/linux64Gcc/c++ in two steps :
- first set CC = g++ -std=c++11 -m64 - errors occur with MPI_ files not found. Then I set : CC = mpicc -std=c++11 -m64 and I run the Allwmake again |
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