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[snappyHexMesh] sHM: FATAL ERROR: More than six unsigned transforms detected |
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Senior Member
Julien
Join Date: Jun 2012
Location: France
Posts: 152
Rep Power: 15 ![]() |
Hi everybody,
I am running shM on a distant cluster, so in parallel. Here is an extract from the error log I had: Code:
[95]
[95]
[51] [179] [95]
[51] [179] --> FOAM FATAL ERROR:
[51] [179] [95] --> FOAM FATAL ERROR: --> FOAM FATAL ERROR: More than six unsigned transforms detected:
6(((0 0 1.77636e-15) (1 0 0 0 1 0 0 0 1) 0) ((1.42109e-14 0 8.88178e-16) (1 0 0 0 1 0 0 0 1) 0) ((-0.0218789 1.42109e-14 -8.88178e-16) (1 0 0 0 1 0 0 0 1) 0) ((-0.0193805 -1.42109e-14 0) (1 0 0 0 1 0 0 0 1) 0) ((0.00320363 0 8.88178e-16) (1 0 0 0 1 0 0 0 1) 0) ((-2.84217e-14 2.84217e-14 0) (1 0 0 0 1 0 0 0 1) 0))
[179] [95] [51] More than six unsigned transforms detected:
6(((-3.55271e-15 0 0) (1 0 0 0 1 0 0 0 1) 0) ((0 0 -1.71973e-06) (1 0 0 0 1 0 0 0 1) 0) ((0 -1.42109e-14 -9.75911e-05) (1 0 0 0 1 0 0 0 1) 0) ((0 0 -3.55271e-15) (1 0 0 0 1 0 0 0 1) 0) ((3.55271e-15 0 0) (1 0 0 0 1 0 0 0 1) 0) ((3.55271e-15 -1.42109e-14 0) (1 0 0 0 1 0 0 0 1) 0))[201] More than six unsigned transforms detected:
6(((0 1.42109e-14 -8.88178e-16) (1 0 0 0 1 0 0 0 1) 0) ((-7.10543e-15 1.42109e-14 0.0291667) (1 0 0 0 1 0 0 0 1) 0) ((3.55271e-15 -1.42109e-14 8.88178e-16) (1 0 0 0 1 0 0 0 1) 0) ((-3.55271e-15 1.42109e-14 9.75911e-05) (1 0 0 0 1 0 0 0 1) 0) ((-3.55271e-15 0 0) (1 0 0 0 1 0 0 0 1) 0) ((2.50953e-05 1.42109e-14 -8.88178e-16) (1 0 0 0 1 0 0 0 1) 0))[191]
[95]
[51]
[28] [179] [191] From function void Foam::globalIndexAndTransform::determineTransforms()
[201]
[51]
[28] [179] [191] From function [201]
From function --> FOAM FATAL ERROR: [95] void Foam::globalIndexAndTransform::determineTransforms()--> FOAM FATAL ERROR: [28] void Foam::globalIndexAndTransform::determineTransforms()
in file
--> FOAM FATAL ERROR:
[191] primitives/globalIndexAndTransform/globalIndexAndTransform.C
[51] [201]
[179] More than six unsigned transforms detected:
6(((0 0 7.10543e-15) (1 0 0 0 1 0 0 0 1) 0) ((0 0 -7.10543e-15) (1 0 0 0 1 0 0 0 1) 0) ((-1.42109e-14 0 -0.0287332) (1 0 0 0 1 0 0 0 1) 0) ((2.84217e-14 0 0) (1 0 0 0 1 0 0 0 1) 0) ((-1.42109e-14 0 0) (1 0 0 0 1 0 0 0 1) 0) ((0 1.42109e-14 7.10543e-15) (1 0 0 0 1 0 0 0 1) 0)) at line in file More than six unsigned transforms detected:
6(((1.77636e-15 -1.42109e-14 1.77636e-15) (1 0 0 0 1 0 0 0 1) 0) ((-3.55271e-15 0 0) (1 0 0 0 1 0 0 0 1) 0) ((0 -1.42109e-14 -1.77636e-15) (1 0 0 0 1 0 0 0 1) 0) ((-1.77636e-15 0 0) (1 0 0 0 1 0 0 0 1) 0) ((0 0 1.77636e-15) (1 0 0 0 1 0 0 0 1) 0) ((1.77636e-15 -1.42109e-14 0) (1 0 0 0 1 0 0 0 1) 0))[28] in file
187primitives/globalIndexAndTransform/globalIndexAndTransform.C
More than six unsigned transforms detected:
6(((0 1.42109e-14 0) (1 0 0 0 1 0 0 0 1) 0) ((3.55271e-15 1.42109e-14 7.10543e-15) (1 0 0 0 1 0 0 0 1) 0) ((3.55271e-15 1.42109e-14 0) (1 0 0 0 1 0 0 0 1) 0) ((0 0 -7.10543e-15) (1 0 0 0 1 0 0 0 1) 0) ((3.55271e-15 0 0.0159216) (1 0 0 0 1 0 0 0 1) 0) ((3.55271e-15 0 0) (1 0 0 0 1 0 0 0 1) 0))primitives/globalIndexAndTransform/globalIndexAndTransform.C[191] . at line [201]
at line
187
[28] 187[191] [95]
FOAM parallel run exiting
I don't understand what's happening. Does anybody know a bit about this Fatal Error ? This error is annoying because it occurs only when the scheduler allows me to work on the cluster, about 2 days after I asked... So it took me 4 days (plus the week-end) to repeat the error. I cannot retry easily changing one parameter at a time to find the problem... I started from a large blockMesh. Then, surfaceFeatureExtract. Then, edition of decomposeParDict: method scotch. Then, decomposePar . Then ,edition (again) of decomposeParDict: method ptscotch. And last: "mpirun snappyHexMesh -parallel -overwrite " but I had the error log mentionned above... What do you need to help me, please? Regards |
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