[lny200912]

Hi, eveyone

I want to use the original solver in openfoam.
So I copy the reactingFoam from the installed directory in my cluster /opt/bwhpc/common/cae/openfoam/v1706/OpenFOAM-v1706/applications/solvers/combustion/reactingFoam to my local folder.


Then I change the reactingFoam.C to my_reactingFoam.C in my folder.

I only change the content in the Make/files:

my_reactingFoam.C
EXE = $(FOAM_USER_APPBIN)/my_reactingFoam


Finally, i run the wclean and wmake commands,

but I got the same error after compiled:
errors:

cae/openfoam/v1706/OpenFOAM-v1706/src/OSspecific/POSIX/lnInclude -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/my_reactingFoam.o -L/opt/bwhpc/common/cae/openfoam/v1706/OpenFOAM-v1706/platforms/linux64GccDPInt32Opt/lib \
-lfiniteVolume -lfvOptions -lmeshTools -lsampling -lturbulenceModels -lcompressibleTurbulenceModels -lreactionThermophysicalModels -lspecie -lcompressibleTransportModels -lfluidThermophysicalModels -lchemistryModel -lODE -lcombustionModels -lOpenFOAM -ldl \
-lm -o /home/kit/itt/qy5011/OpenFOAM/qy5011-v1706/platforms/linux64GccDPInt32Opt/bin/my_reactingFoam
Make/linux64GccDPInt32Opt/my_reactingFoam.o: In function `Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh>::storeOldTimes() const':
my_reactingFoam.C.text._ZNK4Foam14GeometricField IdNS_12fvPatchFieldENS_7volMeshEE13storeOldTimesEv[_ZNK4Foam14GeometricFieldIdNS_12fvPatchFieldENS_7v olMeshEE13storeOldTimesEv]+0x5e): undefined reference to `Foam::string::endsWith(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
Make/linux64GccDPInt32Opt/my_reactingFoam.o: In function `Foam::GeometricField<double, Foam::fvsPatchField, Foam::surfaceMesh>::storeOldTimes() const':
my_reactingFoam.C.text._ZNK4Foam14GeometricField IdNS_13fvsPatchFieldENS_11surfaceMeshEE13storeOldT imesEv[_ZNK4Foam14GeometricFieldIdNS_13fvsPatchFieldENS_1 1surfaceMeshEE13storeOldTimesEv]+0x5e): undefined reference to `Foam::string::endsWith(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
Make/linux64GccDPInt32Opt/my_reactingFoam.o: In function `Foam::GeometricField<Foam::Vector<double>, Foam::fvPatchField, Foam::volMesh>::storeOldTimes() const':
my_reactingFoam.C.text._ZNK4Foam14GeometricField INS_6VectorIdEENS_12fvPatchFieldENS_7volMeshEE13st oreOldTimesEv[_ZNK4Foam14GeometricFieldINS_6VectorIdEENS_12fvPat chFieldENS_7volMeshEE13storeOldTimesEv]+0x5e): undefined reference to `Foam::string::endsWith(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
Make/linux64GccDPInt32Opt/my_reactingFoam.o: In function `Foam::GeometricField<Foam::Vector<double>, Foam::fvsPatchField, Foam::surfaceMesh>::storeOldTimes() const':
my_reactingFoam.C.text._ZNK4Foam14GeometricField INS_6VectorIdEENS_13fvsPatchFieldENS_11surfaceMesh EE13storeOldTimesEv[_ZNK4Foam14GeometricFieldINS_6VectorIdEENS_13fvsPa tchFieldENS_11surfaceMeshEE13storeOldTimesEv]+0x5e): undefined reference to `Foam::string::endsWith(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
Make/linux64GccDPInt32Opt/my_reactingFoam.o.data.rel.ro._ZTVN4Foam8OPstrea mE[_ZTVN4Foam8OPstreamE]+0x80): undefined reference to `Foam::UOPstream::writeQuoted(std::__cxx11::basic_ string<char, std::char_traits<char>, std::allocator<char> > const&, bool)'
collect2: error: ld returned 1 exit status
I found the Foam::string::endsWith defined in the
in the openfoam v1812
src/OpenFOAM/primitives/strings/string/string.CSo I include -lOpenFOAM in my Make/options, but it still does not work.
gcc -v
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/pfs/data1/software_uc1/bwhpc/common/compiler/gnu/7.1.0/bin/../libexec/gcc/x86_64-pc-linux-gnu/7.1.0/lto-wrapper
Target: x86_64-pc-linux-gnu
Configured with: ../configure --prefix=/opt/bwhpc/common/compiler/gnu/7.1.0 --enable-languages=c,c++,lto,fortran,go --disable-multilib --with-tune=generic --with-system-zlib --enable-shared --with-ppl --enable-gnu-unique-object --enable-linker-build-id --with-gmp-lib=/home/hs/hs_hs/hs_doros/bwhpc-rpmbuild/BUILD/gcc-7.1.0/opt/bwhpc/common/compiler/gnu/7.1.0/lib64 --with-gmp-include=/home/hs/hs_hs/hs_doros/bwhpc-rpmbuild/BUILD/gcc-7.1.0/opt/bwhpc/common/compiler/gnu/7.1.0/include --with-mpfr=/home/hs/hs_hs/hs_doros/bwhpc-rpmbuild/BUILD/gcc-7.1.0/opt/bwhpc/common/compiler/gnu/7.1.0 --with-mpc-lib=/home/hs/hs_hs/hs_doros/bwhpc-rpmbuild/BUILD/gcc-7.1.0/opt/bwhpc/common/compiler/gnu/7.1.0/lib64 --with-isl=/home/hs/hs_hs/hs_doros/bwhpc-rpmbuild/BUILD/gcc-7.1.0/opt/bwhpc/common/compiler/gnu/7.1.0
Thread model: posix
gcc version 7.1.0 (GCC)

Could someone can help me to solve this problem? Thank you in advance.

Best regards,
Ningyi

[Tobi]

Hi,

you have a crazy text formatting. I am wondering what you are doing because you are mixing two different OpenFOAM versions (1706 and 1812). Furthermore, did you compile your foam source code or was it an installation from a package (the path /opt/... seems that it was an installation).

[lny200912]

Originally Posted by Tobi

Hi,

you have a crazy text formatting. I am wondering what you are doing because you are mixing two different OpenFOAM versions (1706 and 1812). Furthermore, did you compile your foam source code or was it an installation from a package (the path /opt/... seems that it was an installation).

Hi, Tobi


Thank you for your reply. And this problem was solved now. You are right. I atually mixed two different OpenFOAM version, which caused this problem, beacuase after I installed the v1812, the problem was solved automatically.

Moreover, I installed the mpi/openmpi/3.1-gnu-4.8 for v1706, I guess this mpi version may be not suitable for OpenFOAM v1706, suitable for v1812.


Thank you again.
Best,
Ningyi