[mgharaati]

Dear all

I 'm trying to instal OpenFOAM-2.3.x on Ubuntu 16 according to this link. "http://www.tfd.chalmers.se/~hani/wikis/haniWiki/index.php?title=Install_Ubuntu_14.04_LTS,_OpenFOAM-2.3.x,_foam-extend-3.1_etc._on_your_own_laptop&oldid=47 "

After entering the following command

./Allwmake

I faced to these errors. Would you please help me how I can solve this.

-lfiniteVolume -lmeshTools -lOpenFOAM -ldl -lm -o /home/gharaati/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/bin/solidEquilibriumDisplacementFoam
/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/lib/libtriSurface.so: undefined reference to `yyFlexLexer::yywrap()'
collect2: error: ld returned 1 exit status
/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/wmake/Makefile:149: recipe for target '/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/bin/solidEquilibriumDisplacementFoam' failed
make[2]: *** [/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/bin/solidEquilibriumDisplacementFoam] Error 1
make[2]: Leaving directory '/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/applications/solvers/stressAnalysis/solidEquilibriumDisplacementFoam'
/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/wmake/MakefileApps:39: recipe for target 'solidEquilibriumDisplacementFoam' failed
make[1]: *** [solidEquilibriumDisplacementFoam] Error 2
make[1]: Target 'application' not remade because of errors.
make[1]: Leaving directory '/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/applications/solvers/stressAnalysis'
/home/gharaati/OpenFOAM/OpenFOAM-2.3.x/wmake/MakefileApps:39: recipe for target 'stressAnalysis' failed
make: *** [stressAnalysis] Error 2
make: Target 'application' not remade because of errors.

Also. I 'm new with Ubuntu and openFOAM.

[wyldckat]

Quick answer: To fix that problem, see this post: Problems installing OpenFOAM 2.4.0 on Fedora 23 - post #3

[mgharaati]

Originally Posted by wyldckat

Quick answer: To fix that problem, see this post: Problems installing OpenFOAM 2.4.0 on Fedora 23 - post #3

Thanks for your help.

[fertinaz]

Hey there Bruno

=================================================
Never mind. Running from scratch after a wclean all seems to solve the issues!
=================================================

I am trying to install OF-2.4.0 on a GPU Cluster with Power 8 CPUs. OS is Ubuntu 16.04.

Allwmake fails at the exact same step as above mentioned, however since I applied your fix I don't have any undefined references to flex (currently using version 2.6.0).

I am wondering if you can make any suggestions. Please see log below:

+ wmake libso phaseCompressibleTurbulenceModels
make[2]: Entering directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/multiphase/twoPhaseEulerFoam/phaseCompressibleTurbulenceModels'
'/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libphaseCompressibleTurbulenceModels.so' is up to date.
make[2]: Leaving directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/multiphase/twoPhaseEulerFoam/phaseCompressibleTurbulenceModels'
+ wmake
make[2]: Entering directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/multiphase/twoPhaseEulerFoam'
g++ -m64 -mcpu=power8 -DlinuxPPC64le -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -O3  -DNoRepository -ftemplate-depth-100 -I/$WM_PROJECT_DIR/src/transportModels/compressible/lnInclude -I/$WM_PROJECT_DIR/src/thermophysicalModels/basic/lnInclude -I/$WM_PROJECT_DIR/src/finiteVolume/lnInclude -I/$WM_PROJECT_DIR/src/transportModels/incompressible/lnInclude -I/$WM_PROJECT_DIR/src/TurbulenceModels/turbulenceModels/lnInclude -I/$WM_PROJECT_DIR/src/TurbulenceModels/compressible/lnInclude -I/$WM_PROJECT_DIR/src/TurbulenceModels/phaseCompressible/lnInclude -IphaseCompressibleTurbulenceModels/lnInclude -IinterfacialModels/lnInclude -ItwoPhaseSystem/lnInclude -I/$WM_PROJECT_DIR/src/finiteVolume/lnInclude -I/$WM_PROJECT_DIR/src/fvOptions/lnInclude -I/$WM_PROJECT_DIR/src/meshTools/lnInclude -I/$WM_PROJECT_DIR/src/sampling/lnInclude -IlnInclude -I. -I/$WM_PROJECT_DIR/src/OpenFOAM/lnInclude -I/$WM_PROJECT_DIR/src/OSspecific/POSIX/lnInclude   -fPIC -Xlinker --add-needed Make/linuxPPC64leGccDPOpt/twoPhaseEulerFoam.o -L/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib \
     -lfluidThermophysicalModels -lspecie -lturbulenceModels -lcompressibleTurbulenceModels -lphaseCompressibleTurbulenceModels -lincompressibleTransportModels -lcompressibleTwoPhaseSystem -lcompressibleEulerianInterfacialModels -lfiniteVolume -lfvOptions -lmeshTools -lsampling -lOpenFOAM -ldl   -lm -o /$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/bin/twoPhaseEulerFoam
/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libcompressibleTwoPhaseSystem.so: undefined reference to `Foam::TurbulenceModel<Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh>, Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh>, Foam::compressibleTurbulenceModel, Foam::phaseModel>::dictionaryConstructorTablePtr_'
/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libcompressibleTwoPhaseSystem.so: undefined reference to `Foam::turbulenceModel::propertiesName'
collect2: error: ld returned 1 exit status
/$WM_PROJECT_DIR/wmake/Makefile:149: recipe for target '/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/bin/twoPhaseEulerFoam' failed
make[2]: *** [/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/bin/twoPhaseEulerFoam] Error 1
make[2]: Leaving directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/multiphase/twoPhaseEulerFoam'
/$WM_PROJECT_DIR/wmake/MakefileApps:39: recipe for target 'twoPhaseEulerFoam' failed
make[1]: *** [twoPhaseEulerFoam] Error 2
make[1]: Target 'application' not remade because of errors.
make[1]: Leaving directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/multiphase'
/$WM_PROJECT_DIR/wmake/MakefileApps:39: recipe for target 'multiphase' failed
make: *** [multiphase] Error 2
make[1]: Entering directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/stressAnalysis'
make[2]: Entering directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/stressAnalysis/solidDisplacementFoam'
make[2]: '/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/bin/solidDisplacementFoam' is up to date.
make[2]: Leaving directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/stressAnalysis/solidDisplacementFoam'
make[2]: Entering directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/stressAnalysis/solidEquilibriumDisplacementFoam'
make[2]: '/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/bin/solidEquilibriumDisplacementFoam' is up to date.
make[2]: Leaving directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/stressAnalysis/solidEquilibriumDisplacementFoam'
make[1]: Leaving directory '/gpfs/home/$WM_PROJECT_DIR/applications/solvers/stressAnalysis'
make: Target 'application' not remade because of errors.

When I do a grep "undefined reference" to the log.Allwmake, I see that it starts with:

1395:Make/linuxPPC64leGccDPOpt/R.o:(.toc+0x1e8): undefined reference to `Foam::incompressible::turbulenceModel::typeName'
1396:Make/linuxPPC64leGccDPOpt/R.o:(.toc+0x200): undefined reference to `Foam::compressible::turbulenceModel::typeName'
1397:Make/linuxPPC64leGccDPOpt/R.o:(.toc+0x208): undefined reference to `typeinfo for Foam::compressible::turbulenceModel'

Then it basically cannot compile:

1843:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libSLGThermo.so: undefined reference to `Foam::solidMixtureProperties::New(Foam::dictionary const&)'
1858:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libDPMTurbulenceModels.so: undefined reference to `Foam::incompressibleTurbulenceModel::mu() const'
1859:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libDPMTurbulenceModels.so: undefined reference to `Foam::incompressibleTurbulenceModel::mut() const'
1860:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libDPMTurbulenceModels.so: undefined reference to `typeinfo for Foam::incompressibleTurbulenceModel'
1861:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libDPMTurbulenceModels.so: undefined reference to `Foam::incompressibleTurbulenceModel::mut(int) const'
1862:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libDPMTurbulenceModels.so: undefined reference to `Foam::incompressibleTurbulenceModel::muEff() const'
1863:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libDPMTurbulenceModels.so: undefined reference to `vtable for Foam::incompressibleTurbulenceModel'

This part repeats a number of times. Before Allwmake completely fails below is the final errors:

1995:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libSLGThermo.so: undefined reference to `Foam::solidMixtureProperties::New(Foam::dictionary const&)'
2023:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libinterfaceProperties.so: undefined reference to `typeinfo for Foam::alphaContactAngleFvPatchScalarField'
2024:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libinterfaceProperties.so: undefined reference to `Foam::alphaContactAngleFvPatchScalarField::typeName'
2033:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libinterfaceProperties.so: undefined reference to `typeinfo for Foam::alphaContactAngleFvPatchScalarField'
2034:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libinterfaceProperties.so: undefined reference to `Foam::alphaContactAngleFvPatchScalarField::typeName'
2146:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libcompressibleTwoPhaseSystem.so: undefined reference to `Foam::TurbulenceModel<Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh>, Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh>, Foam::compressibleTurbulenceModel, Foam::phaseModel>::dictionaryConstructorTablePtr_'
2147:/$WM_PROJECT_DIR/platforms/linuxPPC64leGccDPOpt/lib/libcompressibleTwoPhaseSystem.so: undefined reference to `Foam::turbulenceModel::propertiesName'

Thanks a lot.