patchAverage on slurm cluster

hellsign48 · February 5, 2020, 05:43

I'm using old version of OF so patchAverage works on my work station with no problems:

Quote:

patchAverage p bottom > pressure.txt

however when I do the same on cluster it gives no results and just makes an empty file. Does anyone know if it should be done different way on clusters?

agustinvo · February 5, 2020, 08:11

When you run patchAverage in you local workstation, is the case decomposed or not? And what about in the slurm cluster?

If you are running the command in decomposed timeSteps, the problem might come up from there.

hellsign48 · February 5, 2020, 08:15

In both cases it's in reconstructed case. I'm also not getting any error message or complain. It does something for couple of seconds but doesn't give any output (on cluster).

JNSN · February 10, 2020, 16:57

Are you running with srun command?

hellsign48 · February 11, 2020, 03:41

I tried ruining it with sbatch and also with just patchAverage in terminal. Still no luck.

JNSN · February 11, 2020, 06:19

With 'in terminal ' you mean outside slum? No interactive console?

hellsign48 · February 11, 2020, 06:55

Yes I meant outside slurm. This way I use roconstructPar without any problems.

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February 5, 2020, 08:11		#2
agustinvo Senior Member Agustín Villa Join Date: Apr 2013 Location: Fuenlabrada Posts: 304 Rep Power: 13	When you run patchAverage in you local workstation, is the case decomposed or not? And what about in the slurm cluster? If you are running the command in decomposed timeSteps, the problem might come up from there.

February 5, 2020, 08:15		#3
hellsign48 New Member Join Date: Feb 2020 Posts: 6 Rep Power: 4	In both cases it's in reconstructed case. I'm also not getting any error message or complain. It does something for couple of seconds but doesn't give any output (on cluster).

February 10, 2020, 16:57		#4
JNSN Senior Member Jan Join Date: Jul 2009 Location: Hamburg Posts: 119 Rep Power: 18	Are you running with srun command?

February 11, 2020, 03:41		#5
hellsign48 New Member Join Date: Feb 2020 Posts: 6 Rep Power: 4	I tried ruining it with sbatch and also with just patchAverage in terminal. Still no luck.

February 11, 2020, 06:19		#6
JNSN Senior Member Jan Join Date: Jul 2009 Location: Hamburg Posts: 119 Rep Power: 18	With 'in terminal ' you mean outside slum? No interactive console?

February 11, 2020, 06:55		#7
hellsign48 New Member Join Date: Feb 2020 Posts: 6 Rep Power: 4	Yes I meant outside slurm. This way I use roconstructPar without any problems.